getArch_ids: Get the potential architecture identifiers for the conserved...
In geneHummus: A Pipeline to Define Gene Families in Legumes and Beyond
Description
Usage
Arguments
Value
Author(s)
Examples
Description
Parses the SPARCLE database (NCBI) and extract the electronic identifiers
for each conserved domain.
Usage
1
getArch_ids(gene_family)
Arguments
gene_family
A string with the conserved domain(s) defining the gene
family. The domains have to be shown in the same order appearing in
the sequences.
Value
the architectures identifiers for each of the conserved domains.
Author(s)
Jose V. Die
Examples
1
2
arf <- c("pfam06507")
getArch_ids(arf)
geneHummus documentation built on May 2, 2019, 6:19 a.m.
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Description Usage Arguments Value Author(s) Examples
Description
Parses the SPARCLE database (NCBI) and extract the electronic identifiers for each conserved domain.
Usage
1 | getArch_ids(gene_family)
|
Arguments
gene_family |
A string with the conserved domain(s) defining the gene family. The domains have to be shown in the same order appearing in the sequences. |
Value
the architectures identifiers for each of the conserved domains.
Author(s)
Jose V. Die
Examples
1 2 | arf <- c("pfam06507")
getArch_ids(arf)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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