API for glmmTMB
Generalized Linear Mixed Models using Template Model Builder

Global functions
.CI_univariate_monotone Source code
.collectDuplicates Man page Source code
.onLoad Source code
.onUnload Source code
.prt.call.glmmTMB Source code
.prt.call.glmmTMB2 Source code
.tweedie_power Source code
Anova.II.glmmTMB Source code
Anova.III.glmmTMB Source code
Anova.glmmTMB Man page
ConjComp Source code
Effect.glmmTMB Man page
GMRFmarginal Source code
OwlModel Man page
OwlModel_nb1_bs Man page
OwlModel_nb1_bs_mcmc Man page
Owls Man page
RHSForm Man page
RHSForm<- Man page
Salamanders Man page
VarCorr Man page
VarCorr.glmmTMB Man page
abbrDeparse Source code
addForm Man page
addForm0 Man page
as.data.frame.ranef.glmmTMB Man page
asDf0 Source code
assertIdenticalModels Source code
beta_family Man page Source code
betabinomial Man page Source code
binomialType Source code
cat.f Source code
cat.f2 Source code
checkDepPackageVersion Man page Source code
check_dots Source code
coef. Source code
coef.glmmTMB Man page
compois Man page Source code
confint.glmmTMB Man page
confint.profile.glmmTMB Man page Source code
df.residual.glmmTMB Source code
diagnose Man page Source code
dnbinom1 Source code
downstream_methods Man page
drop.special Man page
dropHead Man page
dtruncated_nbinom1 Man page Source code
dtruncated_nbinom2 Man page Source code
dtruncated_poisson Man page Source code
emmeans.glmmTMB Man page
epil2 Man page
expandAllGrpVar Man page
expandDoubleVert Man page Source code
expandGrpVar Man page
extractAIC.glmmTMB Source code
extractForm Man page
family.glmmTMB Source code
family_factory Source code
family_glmmTMB Man page
findReTrmClasses Man page
findbars_x Man page
fitTMB Man page Source code
fix_predvars Source code
fixef Man page
fixef.glmmTMB Man page Source code
formComp Source code
formatVC Man page
formula.glmmTMB Man page
genpois Man page Source code
getAllParnames Source code
getCapabilities Man page Source code
getEstParnames Source code
getGrpVar Man page Source code
getME Man page
getME.glmmTMB Man page Source code
getParList Source code
getParms Source code
getReStruc Man page Source code
getXReTrms Man page Source code
get_cor Man page Source code
get_pars Source code
glmmTMB Man page Source code
glmmTMBControl Man page Source code
gt_load Man page Source code
hasRandom Source code
ident Source code
inForm Man page
in_glm_fit Source code
isLMM.glmmTMB Man page
isNullPointer Source code
isREML Source code
llikAIC Source code
logLik.glmmTMB Source code
makeOp Man page
make_family Source code
match_which Source code
mkTMBStruc Man page Source code
model.frame.glmmTMB Source code
model.matrix.glmmTMB Man page
nbinom1 Man page Source code
nbinom2 Man page Source code
ngrps Source code
ngrps.default Source code
ngrps.factor Source code
ngrps.glmmTMB Source code
noSpecials Man page
noZI Source code
nobs.glmmTMB Source code
nullSparseMatrix Source code
numFactor Man page Source code
okWeights Source code
omp_check Man page Source code
parallel_default Source code
parseNumLevels Man page Source code
pnbinom1 Source code
predict.glmmTMB Man page Source code
print.VarCorr.glmmTMB Man page
print.fixef.glmmTMB Source code
print.glmmTMB Source code
print.ranef.glmmTMB Source code
print.summary.glmmTMB Source code
print.vcov.glmmTMB Source code
printDispersion Source code
printFamily Source code
profile.glmmTMB Man page Source code
qnbinom1 Source code
ranef Man page
ranef.glmmTMB Man page Source code
reOnly Man page
recover_data.glmmTMB Source code
reexports Man page
refit Man page
refit.glmmTMB Man page
reinstalling Man page
relatives Source code
replaceForm Man page
residuals.glmmTMB Man page Source code
rnbinom1 Source code
sigma Man page
sigma.glmmTMB Man page Source code
simulate.glmmTMB Man page
sort_termlabs Source code
splitForm Man page
startParams Man page Source code
stripReTrms Source code
sumTerms Man page
summary.glmmTMB Source code
terms.glmmTMB Man page Source code
trivialDisp Source code
trivialFixef Source code
truncated_compois Man page Source code
truncated_genpois Man page Source code
truncated_nbinom1 Man page Source code
truncated_nbinom2 Man page Source code
truncated_poisson Man page Source code
tweedie Man page Source code
up2date Man page Source code
usesDispersion Source code
vcov. Source code
vcov.glmmTMB Man page Source code
weights.glmmTMB Man page
zeroDisp Source code
ziGamma Man page Source code
glmmTMB documentation built on July 12, 2022, 5:06 p.m.