Files in glmmTMB
Generalized Linear Mixed Models using Template Model Builder
MD5
NAMESPACE
DESCRIPTION
R/methods.R
R/enum.R
R/emmeans.R
R/Anova.R
R/VarCorr.R
R/predict.R
R/reformulas.R
R/lme4_utils_temp.R
R/glmmTMB.R
R/profile.R
R/utils_covstruct.R
R/zzz.R
R/effects.R
R/family.R
R/utils.R
R/diagnose.R
src/Makevars
src/init.h
src/glmmTMB.cpp
src/utils.cpp
src/distrib.h
inst/NEWS.Rd
inst/TMB-version
inst/CITATION
inst/Matrix-version
inst/doc/covstruct.rmd
inst/doc/parallel.R
inst/doc/miscEx.R
inst/doc/troubleshooting.R
inst/doc/troubleshooting.rmd
inst/doc/hacking.R
inst/doc/miscEx.rmd
inst/doc/mcmc.R
inst/doc/miscEx.html
inst/doc/sim.rmd
inst/doc/model_evaluation.Rnw
inst/doc/parallel.rmd
inst/doc/model_evaluation.pdf
inst/doc/parallel.html
inst/doc/glmmTMB.R
inst/doc/hacking.rmd
inst/doc/glmmTMB.Rnw
inst/doc/mcmc.html
inst/doc/sim.html
inst/doc/hacking.html
inst/doc/model_evaluation.R
inst/doc/mcmc.rmd
inst/doc/troubleshooting.html
inst/doc/covstruct.R
inst/doc/sim.R
inst/doc/covstruct.html
inst/doc/glmmTMB.pdf
inst/vignette_data/volcano_data.png
inst/vignette_data/sherman.csv
inst/vignette_data/mcmc.rda
inst/vignette_data/troubleshooting.R
inst/vignette_data/sherman.R
inst/vignette_data/cs_profile_plot.png
inst/vignette_data/mcmc.R
inst/vignette_data/tmbstan_traceplot.png
inst/vignette_data/model_evaluation.rda
inst/vignette_data/volcano_results.png
inst/vignette_data/plasma.rda
inst/vignette_data/sherman.rda
inst/vignette_data/us_profile_plot.png
inst/vignette_data/model_evaluation.R
inst/example_files/salamander_prof1.rds
inst/example_files/mk_examples.R
inst/example_files/salamander1.rds
inst/other_methods/effectsglmmTMB.R
inst/other_methods/car_methods.R
inst/other_methods/influence_mixed.R
inst/other_methods/lsmeans_methods.R
inst/other_methods/extract.R
inst/test_data/turner_glmmadapt.R
inst/test_data/ffly.csv
inst/test_data/IC_comp_data.rds
inst/test_data/make_ex.R
inst/test_data/turner_bb.rds
inst/test_data/oldfit.rds
inst/test_data/glmmTMB-test-funs.R
inst/test_data/turner_bb_GLMMadaptive.rds
inst/test_data/cygu.rda
inst/test_data/agridat_john.alpha.rds
inst/test_data/cov_struct_order.rds
inst/test_data/models.rda
inst/test_data/strengejacke_nasummary.rds
inst/test_data/Makefile
build/vignette.rds
build/partial.rdb
tests/AAAtest-all.R
tests/testthat/test-reml.R
tests/testthat/test-utils.R
tests/testthat/test-diagnose.R
tests/testthat/test-methods.R
tests/testthat/test-smooths.R
tests/testthat/test-zi.R
tests/testthat/test-predict.R
tests/testthat/test-offset.R
tests/testthat/test-misc.R
tests/testthat/test-start.R
tests/testthat/test-checkRank.R
tests/testthat/test-weight.R
tests/testthat/test-families.R
tests/testthat/test-varstruc.R
tests/testthat/test-saveload.R
tests/testthat/test-formulas.R
tests/testthat/setup_makeex.R
tests/testthat/test-edgecases.R
tests/testthat/test-downstream.R
tests/testthat/test-rr.R
tests/testthat/test-VarCorr.R
tests/testthat/test-altopt.R
tests/testthat/test-control.R
tests/testthat/test-Anova.R
tests/testthat/test-basics.R
tests/testthat/test-env.R
tests/testthat/test-mapopt.R
tests/testthat/test-bootMer.R
tests/testthat/test-sparseX.R
tests/testthat/test-disp.R
vignettes/covstruct.rmd
vignettes/troubleshooting.rmd
vignettes/timingFuns.R
vignettes/framed.sty
vignettes/lineno.sty
vignettes/miscEx.rmd
vignettes/chicago.bst
vignettes/InstEvalTimings.rda
vignettes/glmmTMB.bib
vignettes/sim.rmd
vignettes/model_evaluation.Rnw
vignettes/parallel.rmd
vignettes/contraceptionTimings.rda
vignettes/timingInstEval.R
vignettes/hacking.rmd
vignettes/glmmTMB.Rnw
vignettes/timingContraception.R
vignettes/mcmc.rmd
data/Owls.rda
data/Salamanders.rda
data/epil2.rda
man/predict.glmmTMB.Rd
man/findReTrmClasses.Rd
man/RHSForm.Rd
man/diagnose.Rd
man/dot-collectDuplicates.Rd
man/family_params.Rd
man/reexports.Rd
man/vcov.glmmTMB.Rd
man/downstream_methods.Rd
man/expandGrpVar.Rd
man/gt_load.Rd
man/glmmTMB_methods.Rd
man/getXReTrms.Rd
man/omp_check.Rd
man/formatVC.Rd
man/Owls.Rd
man/numFactor.Rd
man/weights.glmmTMB.Rd
man/dot-checkRankX.Rd
man/formula.glmmTMB.Rd
man/dtruncated_nbinom2.Rd
man/epil2.Rd
man/getGrpVar.Rd
man/print.VarCorr.glmmTMB.Rd
man/getME.glmmTMB.Rd
man/VarCorr.glmmTMB.Rd
man/glmmTMB.Rd
man/confint.glmmTMB.Rd
man/get_cor.Rd
man/dot-adjustX.Rd
man/ranef.glmmTMB.Rd
man/bootmer_methods.Rd
man/startParams.Rd
man/residuals.glmmTMB.Rd
man/Salamanders.Rd
man/sub_specials.Rd
man/nbinom2.Rd
man/formfuns.Rd
man/splitForm.Rd
man/checkDepPackageVersion.Rd
man/sigma.glmmTMB.Rd
man/reinstalling.Rd
man/fitTMB.Rd
man/mkTMBStruc.Rd
man/profile.glmmTMB.Rd
man/fixef.Rd
man/glmmTMBControl.Rd
man/getReStruc.Rd
man/getCapabilities.Rd
man/simulate_new.Rd
man/simulate.glmmTMB.Rd
