data_ex_genind: data_ex_genind genetic dataset
In graph4lg: Build Graphs for Landscape Genetics Analysis
data_ex_genind R Documentation
data_ex_genind genetic dataset
Description
Genetic dataset from genetic simulation on CDPOP
200 individuals, 10 populations
20 microsatellite loci (3 digits coding)
100 generations simulated
Usage
data_ex_genind
Format
An object of type 'genind'
Details
The simulation was made with CDPOP during 100 generations.
Dispersal was possible between the 10 populations. Its probability depended
on the cost distance between populations, calculated on a simulated
resistance surface (raster). Mutations were not possible. There
were initially 600 alleles in total (many disappeared because of drift).
Population stayed constant
with a sex-ratio of 1. Generations did not overlap.
This simulation includes a part of stochasticity and these data result
from only 1 simulation run.
References
\insertReflandguth2010cdpopgraph4lg
Examples
data("data_ex_genind")
length(unique(data_ex_genind@pop))
graph4lg documentation built on Feb. 16, 2023, 5:43 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| data_ex_genind | R Documentation |
data_ex_genind genetic dataset
Description
Genetic dataset from genetic simulation on CDPOP 200 individuals, 10 populations 20 microsatellite loci (3 digits coding) 100 generations simulated
Usage
data_ex_genind
Format
An object of type 'genind'
Details
The simulation was made with CDPOP during 100 generations. Dispersal was possible between the 10 populations. Its probability depended on the cost distance between populations, calculated on a simulated resistance surface (raster). Mutations were not possible. There were initially 600 alleles in total (many disappeared because of drift). Population stayed constant with a sex-ratio of 1. Generations did not overlap. This simulation includes a part of stochasticity and these data result from only 1 simulation run.
References
\insertReflandguth2010cdpopgraph4lg
Examples
data("data_ex_genind")
length(unique(data_ex_genind@pop))
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.