Description Usage Arguments Details Author(s) See Also
Plots correlations and groupings of haplotype-markers for a given window
1 2 | ## S4 method for signature 'hbr'
inspect_window(object, window, colCluster = T)
|
object |
object of class |
window |
number of the window, which should be inspected |
colCluster |
boolean value indicating whether columns in the output correlation plot should be clustered or the original positions of the markers reflecting genomic positions should be kept. |
The plotting method operates on hbr
objects. For a
specified window the correlation matrix for identified haplotype-block markers
in this window is visualized also indicating haplotype-block identity.
Susanne U. Franssen
hbr
ex_dat
summary.hbr
plot.hbr
plot_cluster_trajectories
plot_marker_trajectories
map
rev_map
markers
plot_hbr_freq
inspect_window_PCA
inspect_window_avLink
inspect_window_dbScan
number_hbr
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