rev_map-hbr-method: Map from windows to reconstructed haplotype-blocks

In haploReconstruct: Reconstruction of Haplotype-Blocks from Time Series Data

Description

A method returning information which reconstructed haplotype-blocks are present in which windows.

Usage

## S4 method for signature 'hbr'
rev_map(object)

Arguments

object

object of class hbr containing the results of reconstructed haplotype-blocks

Details

The method operates on hbr objects and returns a list summarizing the mapping information from windows to reconstructed haplotype-blocks.

Value

list with elements corresponding to all windows that contain a reconstructed haplotype-block segment. Each element contains a vector of haplotype-block indices that overlap the respective window.

Author(s)

Susanne U. Franssen

See Also

hbr ex_dat summary.hbr plot.hbr plot_cluster_trajectories plot_marker_trajectories map markers plot_hbr_freq inspect_window inspect_window_PCA inspect_window_avLink inspect_window_dbScan number_hbr

haploReconstruct documentation built on May 2, 2019, 1:46 p.m.