API for lme4
Linear Mixed-Effects Models using 'Eigen' and S4

Global functions
.makeCC Man page
.prt.VC Man page
.prt.aictab Man page
.prt.call Man page
.prt.family Man page
.prt.grps Man page
.prt.methTit Man page Man page
.prt.resids Man page
.prt.warn Man page
.simulateFun Man page
Arabidopsis Man page
Cv_to_Sv Man page Source code
Cv_to_Vv Man page Source code
Dyestuff Man page
Dyestuff2 Man page
GHrule Man page Source code
GQN Man page
GQdk Man page Source code
Gamma_simfun Source code
InstEval Man page
NelderMead Man page
NelderMead-class Man page
Nelder_Mead Man page Source code
Pastes Man page
Penicillin Man page
REMLcrit Man page Source code
RHSForm Source code
RglmerWrkIter Source code
Sv_to_Cv Man page Source code
VarCorr Man page
VarCorr.merMod Man page Source code
VerbAgg Man page
Vv_to_Cv Man page Source code
abbrDeparse Source code
ad Source code
all0 Source code
allVarsRec Source code
anova.merMod Man page
anovaLmer Source code
anyBars Source code
arrange.condVar Source code
array_to_bdiag Source code
as.data.frame.VarCorr.merMod Man page Source code
as.data.frame.boot Source code
as.data.frame.ranef.mer Man page Source code
as.data.frame.thpr Man page Source code
as.function.merMod Man page Source code
asDf0 Source code
augment.RE Source code
barnames Source code
bdiag_to_array Source code
bdiag_to_mlist Source code
binomial_simfun Source code
bootMer Man page Source code
cake Man page
cat.f Source code
cbpp Man page
chck1 Source code
check.boundary Source code
checkArgs Source code
checkConv Man page Source code
checkCtrlLevels Source code
checkFormulaData Source code
checkHess Source code
checkNlevels Source code
checkResponse Source code
checkScaleX Source code
checkZdims Source code
checkZrank Source code
chk.cconv Source code
chk.convOpt Source code
chkRank.drop.cols Source code
chooseFace Source code
coef.lmList4 Source code
coef.merMod Man page
coefMer Source code
condVar Source code
confint.lmList4 Source code
confint.merMod Man page Source code
confint.thpr Man page Source code
cont Source code
convergence Man page
cooks.distance.merMod Source code
cov2sdcor Man page Source code
dens Source code
densityplot.thpr Man page Source code
deriv12 Source code
devCrit Source code
devcomp Man page Source code
devfun2 Man page Source code
deviance.merMod Man page Source code
df.residual.merMod Man page Source code
dim.merMod Source code
doCheck Source code
dotplot.coef.mer Source code
dotplot.ranef.mer Man page Source code
drop1.merMod Man page Source code
dropOffset Source code
dummy Man page Source code
est_theta Source code
expandDoubleVerts Man page Source code
extractAIC.merMod Man page Source code
factorize Man page Source code
family.glmResp Source code
family.lmResp Source code
family.merMod Man page Source code
family.nlsResp Source code
family2char Source code
famlink Source code
findbars Man page Source code
fitted.merMod Man page Source code
fixed.effects Man page Source code
fixef Man page
fixef.merMod Man page Source code
forceCopy Source code
format.perc Source code
formatVC Man page Source code
formula.lmList4 Source code
formula.merMod Man page Source code
fortify Man page Source code
fortify.merMod Man page Source code
gamma.shape.merMod Source code
gaussian_simfun Source code
get.checkingOpts Source code
get.orig.levs Source code
get.which Source code
getConv Source code
getCovariateFormula Source code
getData Source code
getFixedFormula Source code
getGroups.lmList4 Source code
getGroupsFormula Source code
getGroupsFormula.merMod Source code
getIDLabels Source code
getL Man page
getL,merMod-method Man page
getME Man page Source code
getME.merMod Man page Source code
getNBdisp Source code
getNBdisp.fam Source code
getOptfun Source code
getResponseFormula Source code
getStart Source code
get_clen Source code
glFormula Man page Source code
glmFamily Man page
glmFamily-class Man page
glmResp Man page
glmResp-class Man page
glmer Man page Source code
glmer.nb Man page Source code
glmerControl Man page Source code
glmerLaplaceHandle Man page Source code
glmerMod-class Man page
glmerPwrssUpdate Source code
golden Man page
golden-class Man page
grad.ctr Source code
grad.ctr2 Source code
grad.ctr3 Source code
grad.ctr4 Source code
gradient Source code
grouseticks Man page
grouseticks_agg Man page
grpfact Source code
hasNoScale Source code
hasScale Source code Source code
hatvalues.merMod Man page Source code
hessian Source code
influence.merMod Source code
isAnyArgBar Source code
isBar Source code
isFlexLambda Source code
isGLMM Man page Source code
isGLMM.merMod Man page Source code
isGLMlist Source code
isLMM Man page Source code
isLMM.merMod Man page Source code
isNBfamily Source code
isNLMM Man page Source code
isNLMM.merMod Man page Source code
isNested Man page Source code
isRE Source code
isREML Man page Source code
isREML.merMod Man page Source code
lFormula Man page Source code
levelfun Source code
llikAIC Man page Source code
lmList Man page Source code
lmList4-class Man page
lmResp Man page
lmResp-class Man page
lme4 Man page
lme4-package Man page
lmer Man page Source code
lmerControl Man page Source code
lmerMod-class Man page
lmerResp Man page
lmerResp-class Man page
log.thpr Man page Source code
logLik.merMod Man page Source code
logProf Man page Source code
makeCC Source code
makeFac Source code
mcmcsamp Man page Source code
mcmcsamp.merMod Source code
merMod Man page
merMod-class Man page
merMod.msgs Source code
merPredD Man page
merPredD-class Man page
methTitle Man page Source code
minimalOptinfo Source code
missDataFun Source code
mkBlist Source code
mkDataTemplate Man page Source code
mkGlmerDevfun Man page Source code
mkLmerDevfun Man page Source code
mkMerMod Man page Source code
mkMinimalData Source code
mkNewReTrms Source code
mkParsTemplate Man page Source code
mkPfun Source code
mkReTrms Man page Source code
mkRespMod Man page Source code
mkVarCorr Man page Source code
mkdevfun Source code
mlist2vec Man page Source code
mlist_to_array Source code
mmList Source code
mmList.formula Source code
mmList.merMod Source code
model.frame.merMod Man page Source code
model.matrix.merMod Man page Source code
modelFormula Source code
modelMatrixDrop Source code
modular Man page
mygrad Source code
namedList Source code
negative.binomial Man page
negative.binomial_simfun Source code
ngrps Man page Source code
ngrps.default Source code
ngrps.factor Source code
ngrps.merMod Man page Source code
nlformula Man page Source code
nlmer Man page Source code
nlmerControl Man page Source code
nlmerMod-class Man page
nlminbwrap Man page Source code
nloptwrap Man page
nlsResp Man page
nlsResp-class Man page
noLHSform Source code
nobars Man page Source code
nobars_ Source code
nobs Man page
nobs.merMod Man page Source code
normalizeFamilyName Source code
npar.merMod Source code
onLoad Source code
onUnload Source code
optTheta Source code
optimizeGlmer Man page Source code
optimizeLmer Man page Source code
optinfo Source code
optwrap Source code
panel.thpr Source code
plot.coef.mer Source code
plot.lmList Man page
plot.lmList4.confint Source code
plot.merMod Man page Source code
plot.ranef.mer Source code
plot.summary.mer Source code
poisson_simfun Source code
pooledSD Source code
predict.merMod Man page Source code
predy Source code
print.VarCorr.merMod Man page Source code
print.merMod Man page Source code
print.ranef.mer Source code
print.summary.merMod Man page Source code
profile-methods Man page
profile.merMod Man page Source code
profnames Source code
prt.VC Source code
prt.aictab Source code
prt.call Source code
prt.family Source code
prt.grps Source code
prt.methTit Source code
prt.resids Source code
prt.warn Source code
pvalues Man page
qqmath.merMod Man page Source code
qqmath.ranef.mer Man page Source code
quickSimulate Source code
random.effects Source code
ranef Man page
ranef.merMod Man page Source code
reFormHack Source code
reOnly Source code
rePos Man page
rePos-class Man page
reexpr Source code
refit Man page Source code
refit.merMod Man page Source code
refit2.merMod Source code
refitML Man page Source code
refitML.merMod Man page Source code
refitNB Source code
residuals.glmResp Man page Source code
residuals.lmResp Man page Source code
residuals.merMod Man page Source code
rstudent.merMod Source code
sDiagonal.sq.matrix Source code
sacos Source code
safeDeparse Source code
safe_chol Source code
safe_pchisq Source code
sdcor2cov Man page Source code
setNBdisp Source code
setParams Source code
show,lmList4-method Man page
show,merMod-method Man page
show.merMod Man page
show.summary.merMod Man page
sigma Man page
sigma.lmList4 Source code
sigma.merMod Man page Source code
simpleCap Source code
simulate.formula Man page Source code
simulate.merMod Man page Source code
simulateFun Source code
sleepstudy Man page
splitFormula Source code
splom.thpr Man page Source code
stripExpr Source code
subbars Man page Source code
subnms Source code
summary.merMod Man page Source code
summary.summary.merMod Man page Source code
tauij Source code
termnms Source code
terms.merMod Man page Source code
testLevel Source code
tnames Source code
troubleshooting Man page
unscaledVar Source code
update.lmList4 Source code
update.merMod Man page Source code
updateGlmerDevfun Man page Source code
updateStart Source code
varianceProf Man page Source code
vcconv Man page
vcov.merMod Man page Source code
vcov.summary.merMod Man page Source code
vec2STlist Man page Source code
vec2mlist Man page Source code
weights.merMod Man page Source code
wmsg Source code
xyplot.thpr Man page Source code
|| Man page
lme4 documentation built on Aug. 18, 2018, 1:05 a.m.