calculate_mcc: 'calculate_mcc'
In minSNPs: Resolution-Optimised SNPs Searcher
calculate_mcc R Documentation
calculate_mcc
Description
calculate_mcc is used to calculate the MCC score given the SNP profile.
Usage
calculate_mcc(pattern, goi, MUST_HAVE_TARGET = TRUE)
Arguments
pattern
the SNP profile for each samples
goi
the samples belonging to the group of interest
MUST_HAVE_TARGET
whether to force the profile to have at least 1 target profile
(the profile containing the most goi)
Value
the MCC score
minSNPs documentation built on May 29, 2024, 2:48 a.m.
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| calculate_mcc | R Documentation |
calculate_mcc
Description
calculate_mcc is used to calculate the MCC score given the SNP profile.
Usage
calculate_mcc(pattern, goi, MUST_HAVE_TARGET = TRUE)
Arguments
pattern |
the SNP profile for each samples |
goi |
the samples belonging to the group of interest |
MUST_HAVE_TARGET |
whether to force the profile to have at least 1 target profile (the profile containing the most goi) |
Value
the MCC score
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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