estimate_coverage: 'estimate_coverage'
In minSNPs: Resolution-Optimised SNPs Searcher
View source: R/search_from_reads.R
estimate_coverage R Documentation
estimate_coverage
Description
estimate_coverage
estimate_coverage estimate the average coverage by comparing number of bases from reads to genome size
Usage
estimate_coverage(read_lengths, genome_size)
Arguments
read_lengths
the lengths of the reads
genome_size
the genome size
Value
will return an estimated average coverage
minSNPs documentation built on May 29, 2024, 2:48 a.m.
R Package Documentation
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View source: R/search_from_reads.R
| estimate_coverage | R Documentation |
estimate_coverage
Description
estimate_coverage
estimate_coverage estimate the average coverage by comparing number of bases from reads to genome size
Usage
estimate_coverage(read_lengths, genome_size)
Arguments
read_lengths |
the lengths of the reads |
genome_size |
the genome size |
Value
will return an estimated average coverage
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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