iterate_merge: 'iterate_merge'

In minSNPs: Resolution-Optimised SNPs Searcher

iterate_merge

Description

iterate_merge is used to combine > 2 fastas iteratively.

Usage

iterate_merge(
  fastas,
  metas,
  ref,
  method = "full",
  bp = BiocParallel::SerialParam(),
  ...
)

Arguments

fastas	list of fastas read into memory to join
metas	list of metas read into memory to join
ref	name of the reference genome (needs to be in both fasta files)
method	how to join the 2 fasta, currently supported methods are: inner, full
bp	the BiocParallel backend
...	all other arguments

Value

Will return a list containing a merged FASTA and a meta.

minSNPs documentation built on May 29, 2024, 2:48 a.m.