identify_overlaps: 'identify_overlaps'
In minSNPs: Resolution-Optimised SNPs Searcher
View source: R/search_string_generation.R
identify_overlaps R Documentation
identify_overlaps
Description
identify_overlaps identify the overlapping SNPs in the sequences
Usage
identify_overlaps(position_reference, genome_position, prev, after)
Arguments
position_reference
the mapping of position
in SNP matrix to reference genome
genome_position
the position of the SNP in the reference genome
prev
number of bases before the SNP included in the search string
after
number of bases after the SNP included in the search string
Value
a list containing 2 dataframes listing the bystander SNPs
in the flanking sequence before and after the SNPs
minSNPs documentation built on May 29, 2024, 2:48 a.m.
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View source: R/search_string_generation.R
| identify_overlaps | R Documentation |
identify_overlaps
Description
identify_overlaps identify the overlapping SNPs in the sequences
Usage
identify_overlaps(position_reference, genome_position, prev, after)
Arguments
position_reference |
the mapping of position in SNP matrix to reference genome |
genome_position |
the position of the SNP in the reference genome |
prev |
number of bases before the SNP included in the search string |
after |
number of bases after the SNP included in the search string |
Value
a list containing 2 dataframes listing the bystander SNPs in the flanking sequence before and after the SNPs
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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