API for nlme
Linear and Nonlinear Mixed Effects Models

Global functions
ACF Man page
ACF.gls Man page Source code
ACF.lme Man page Source code
Alfalfa Man page
Assay Man page
BodyWeight Man page
Cefamandole Man page
Dialyzer Man page
Dim Man page
Dim.corSpatial Man page Source code
Dim.corStruct Man page Source code
Dim.default Man page Source code
Dim.pdCompSymm Man page Source code
Dim.pdDiag Man page Source code
Dim.pdIdent Man page Source code
Dim.pdMat Man page Source code
Dim.pdNatural Man page Source code
Dim.pdSymm Man page Source code
Earthquake Man page
Fatigue Man page
Gasoline Man page
Glucose Man page
Glucose2 Man page
Gun Man page
IGF Man page
Initialize Man page
Initialize.corAR1 Man page
Initialize.corARMA Man page Source code
Initialize.corCAR1 Man page
Initialize.corCompSymm Man page
Initialize.corHF Man page
Initialize.corIdent Man page Source code
Initialize.corLin Man page Source code
Initialize.corNatural Man page Source code
Initialize.corSpatial Man page Source code
Initialize.corSpher Man page Source code
Initialize.corStruct Man page
Initialize.corSymm Man page Source code
Initialize.glsStruct Man page Source code
Initialize.gnlsStruct Man page Source code
Initialize.lmeStruct Man page Source code
Initialize.reStruct Man page Source code
Initialize.varComb Man page Source code
Initialize.varConstPower Man page Source code
Initialize.varExp Man page Source code
Initialize.varFixed Man page Source code
Initialize.varFunc Man page Source code
Initialize.varIdent Man page Source code
Initialize.varPower Man page Source code
LDEsysMat Man page Source code
MEEM Source code
MEdecomp Source code
MEdims Source code
MEestimate Source code
Machines Man page
MathAchSchool Man page
MathAchieve Man page
Meat Man page
Milk Man page
Muscle Man page
Names Man page
Names.formula Man page Source code
Names.listForm Man page Source code
Names.pdBlocked Man page Source code
Names.pdMat Man page Source code
Names.reStruct Man page Source code
Names<- Man page
Names<-.pdBlocked Man page
Names<-.pdMat Man page
Names<-.reStruct Man page
Nitrendipene Man page
Oats Man page
Orthodont Man page
Ovary Man page
Oxboys Man page
Oxide Man page
PBG Man page
Phenobarb Man page
Pixel Man page
Quinidine Man page
Rail Man page
RatPupWeight Man page
Relaxin Man page
Remifentanil Man page
Soybean Man page
Spruce Man page
Tetracycline1 Man page
Tetracycline2 Man page
VarCorr Man page Source code
VarCorr.lme Man page Source code
VarCorr.pdBlocked Man page Source code
VarCorr.pdMat Man page Source code
Variogram Man page
Variogram.corExp Man page Source code
Variogram.corGaus Man page Source code
Variogram.corLin Man page Source code
Variogram.corRatio Man page Source code
Variogram.corSpatial Man page Source code
Variogram.corSpher Man page Source code
Variogram.default Man page Source code
Variogram.gls Man page Source code
Variogram.lme Man page Source code
Wafer Man page
Wheat Man page
Wheat2 Man page
[.groupedData Man page
[.pdBlocked Man page
[.pdMat Man page
[.reStruct Man page
[<-.pdMat Man page
allCoef Man page
anova.gls Man page Source code
anova.lme Man page Source code
as.data.frame.groupedData Man page Source code
as.matrix.corStruct Man page Source code
as.matrix.pdMat Man page Source code
as.matrix.reStruct Man page Source code
asOneFormula Man page
asTable Man page
asTable.groupedData Man page Source code
augPred Man page
augPred.gls Man page Source code
augPred.lmList Man page Source code
augPred.lme Man page Source code
balancedGrouped Man page Source code
bdf Man page
c_deparse Source code
coef.corAR1 Man page Source code
coef.corARMA Man page Source code
coef.corARMAd Man page
coef.corCAR1 Man page Source code
coef.corCompSymm Man page Source code
coef.corHF Man page
coef.corIdent Man page Source code
coef.corLin Man page Source code
coef.corNatural Man page Source code
coef.corSpatial Man page Source code
coef.corSpher Man page Source code
coef.corStruct Man page
coef.corSymm Man page Source code
coef.gls Source code
coef.gnls Man page Source code
coef.lmList Man page
coef.lme Man page Source code
coef.modelStruct Man page Source code
coef.pdBlocked Man page Source code
coef.pdCompSymm Man page Source code
coef.pdDiag Man page Source code
coef.pdIdent Man page Source code
coef.pdMat Man page Source code
coef.pdNatural Man page Source code
coef.pdSymm Man page Source code
coef.reStruct Man page Source code
coef.summary.gls Man page
coef.summary.lme Man page
coef.summary.nlsList Man page Source code
coef.varComb Man page Source code
coef.varConstPower Man page Source code
coef.varExp Man page Source code
coef.varFixed Man page Source code
coef.varFunc Man page Source code
coef.varIdent Man page Source code
coef.varPower Man page Source code
coef<- Man page
coef<-.corAR1 Man page
coef<-.corARMA Man page
coef<-.corCAR1 Man page
coef<-.corCompSymm Man page
coef<-.corHF Man page
coef<-.corIdent Man page
coef<-.corLin Man page
coef<-.corNatural Man page
coef<-.corSpatial Man page
coef<-.corSpher Man page
coef<-.corStruct Man page
coef<-.corSymm Man page
coef<-.modelStruct Man page
coef<-.pdBlocked Man page
coef<-.pdMat Man page
coef<-.reStruct Man page
coef<-.varComb Man page
coef<-.varConstPower Man page
coef<-.varExp Man page
coef<-.varFixed Man page
coef<-.varIdent Man page
coef<-.varPower Man page
coefficients<- Man page
collapse Man page
collapse.groupedData Man page Source code
compareFits Man page
comparePred Man page
comparePred.gls Man page Source code
comparePred.lmList Man page
comparePred.lme Man page
confint.lmList Source code
confint.lme Source code
confint.nlsList Source code
corAR1 Man page
corARMA Man page
corCAR1 Man page
corClasses Man page
corCompSymm Man page
corExp Man page
corFactor Man page
corFactor.compSymm Man page Source code
corFactor.corAR1 Man page Source code
corFactor.corARMA Man page Source code
corFactor.corCAR1 Man page Source code
corFactor.corNatural Man page Source code
corFactor.corSpatial Man page Source code
corFactor.corStruct Man page Source code
corFactor.corSymm Man page Source code
corGaus Man page
corIdent Man page
corLin Man page
corMatrix Man page
corMatrix.compSymm Man page
corMatrix.corAR1 Man page Source code
corMatrix.corARMA Man page Source code
corMatrix.corCAR1 Man page Source code
corMatrix.corCompSymm Man page Source code
corMatrix.corIdent Man page Source code
corMatrix.corNatural Man page Source code
corMatrix.corSpatial Man page Source code
corMatrix.corStruct Man page Source code
corMatrix.corSymm Man page Source code
corMatrix.pdBlocked Man page Source code
corMatrix.pdCompSymm Man page Source code
corMatrix.pdDiag Man page Source code
corMatrix.pdIdent Man page Source code
corMatrix.pdMat Man page Source code
corMatrix.pdSymm Man page
corMatrix.reStruct Man page Source code
corNatural Man page Source code
corRatio Man page
corSpatial Man page
corSpher Man page
corStruct Man page
corSymm Man page
covariate<- Man page
covariate<-.varFunc Man page
createConLin Source code
ergoStool Man page
fdHess Man page Source code
fitted.gls Source code
fitted.glsStruct Man page Source code
fitted.gnlsStruct Man page Source code
fitted.lmList Man page Source code
fitted.lme Man page Source code
fitted.lmeStruct Man page Source code
fitted.nlmeStruct Man page Source code
fixed.effects Man page
fixed.effects.lmList Man page
fixef Man page
fixef.lmList Man page Source code
fixef.lme Source code
formula.gls Source code
formula.gnls Source code
formula.groupedData Source code
formula.lmList Source code
formula.lme Source code
formula.modelStruct Source code
formula.nlme Source code
formula.nlsList Source code
formula.pdBlocked Man page Source code
formula.pdMat Man page Source code
formula.reStruct Man page Source code
formula.varComb Source code
formula.varFunc Source code
gapply Man page
getCTable Source code
getCovariate Man page
getCovariate.corSpatial Man page Source code
getCovariate.corStruct Man page Source code
getCovariate.data.frame Man page Source code
getCovariate.varFunc Man page Source code
getCovariateFormula Man page Source code
getData Man page
getData.gls Man page
getData.gnls Man page Source code
getData.lmList Man page Source code
getData.lme Man page
getData.nlme Man page
getData.nls Man page Source code
getFixDF Source code
getGroups Man page
getGroups.corStruct Man page Source code
getGroups.data.frame Man page
getGroups.gls Man page Source code
getGroups.lmList Man page Source code
getGroups.lme Man page Source code
getGroups.varFunc Man page Source code
getGroupsFormula Man page
getGroupsFormula.default Man page
getGroupsFormula.gls Man page Source code
getGroupsFormula.lmList Man page Source code
getGroupsFormula.lme Man page Source code
getGroupsFormula.reStruct Man page Source code
getParsGnls Source code
getParsNlme Source code
getResponse Man page
getResponse.data.frame Man page Source code
getResponse.gls Source code
getResponse.lmList Source code
getResponse.lme Source code
getResponseFormula Man page Source code
getVarCov Man page Source code
getVarCov.gls Man page Source code
getVarCov.lme Man page Source code
gls Man page
glsApVar Man page Source code
glsApVar.fullGlsLogLik Source code
glsControl Man page
glsEstimate Man page Source code
glsObject Man page
glsStruct Man page
gnls Man page Source code
gnlsApVar Source code
gnlsControl Man page
gnlsObject Man page
gnlsStruct Man page
groupedData Man page
gsummary Man page
intervals Man page
intervals.gls Man page Source code
intervals.lmList Man page Source code
intervals.lme Man page Source code
isBalanced Man page
isBalanced.groupedData Man page Source code
isInitialized Man page
isInitialized.pdBlocked Man page Source code
isInitialized.pdMat Man page Source code
isInitialized.reStruct Source code
lmList Man page
lmList.formula Man page Source code
lmList.groupedData Man page Source code
lme Man page
lme.formula Man page Source code
lme.groupedData Man page Source code
lme.lmList Man page Source code
lmeApVar Source code
lmeApVar.fullLmeLogLik Source code
lmeControl Man page
lmeObject Man page
lmeStruct Man page
logDet Man page
logDet.corIdent Man page Source code
logDet.corStruct Man page Source code
logDet.pdBlocked Man page Source code
logDet.pdCompSymm Man page Source code
logDet.pdDiag Man page Source code
logDet.pdIdent Man page Source code
logDet.pdMat Man page Source code
logDet.pdNatural Man page Source code
logDet.pdSymm Man page Source code
logDet.reStruct Man page Source code
logLik.corStruct Man page Source code
logLik.gls Man page Source code
logLik.glsStruct Man page Source code
logLik.gnls Man page
logLik.gnlsStruct Man page Source code
logLik.lmList Man page Source code
logLik.lme Man page Source code
logLik.lmeStruct Man page Source code
logLik.lmeStructInt Man page Source code
logLik.reStruct Man page Source code
logLik.varComb Man page Source code
logLik.varFunc Man page Source code
matrix<- Man page
matrix<-.pdBlocked Man page
matrix<-.pdMat Man page
matrix<-.reStruct Man page
model.matrix.reStruct Man page Source code
needUpdate Man page
needUpdate.corStruct Man page Source code
needUpdate.default Man page Source code
needUpdate.modelStruct Man page Source code
needUpdate.reStruct Man page Source code
needUpdate.varComb Man page Source code
needUpdate.varIdent Man page Source code
nfGroupedData Man page
nlme Man page Source code
nlme.formula Man page Source code
nlme.nlsList Man page Source code
nlmeControl Man page
nlmeObject Man page
nlmeStruct Man page
nlsList Man page
nlsList.formula Man page Source code
nlsList.selfStart Man page Source code
nmGroupedData Man page
nobs.gls Source code
nobs.gnls Source code
nobs.lme Source code
nonlinModel Source code
onLoad Source code
onUnload Source code
pairs.compareFits Man page Source code
pairs.lmList Man page Source code
pairs.lme Man page Source code
pdBlocked Man page
pdClasses Man page
pdCompSymm Man page
pdConstruct Man page
pdConstruct.pdBlocked Man page Source code
pdConstruct.pdCompSymm Man page Source code
pdConstruct.pdDiag Man page Source code
pdConstruct.pdIdent Man page Source code
pdConstruct.pdLogChol Man page Source code
pdConstruct.pdMat Man page Source code
pdConstruct.pdNatural Man page Source code
pdConstruct.pdSymm Man page Source code
pdDiag Man page
pdFactor Man page Source code
pdFactor.pdBlocked Man page Source code
pdFactor.pdCompSymm Man page Source code
pdFactor.pdDiag Man page Source code
pdFactor.pdIdent Man page Source code
pdFactor.pdLogChol Man page Source code
pdFactor.pdMat Man page Source code
pdFactor.pdNatural Man page Source code
pdFactor.pdSymm Man page Source code
pdFactor.reStruct Man page Source code
pdIdent Man page
pdLogChol Man page
pdMat Man page Source code
pdMatrix Man page
pdMatrix.pdBlocked Man page Source code
pdMatrix.pdCompSymm Man page Source code
pdMatrix.pdDiag Man page Source code
pdMatrix.pdIdent Man page Source code
pdMatrix.pdMat Man page Source code
pdMatrix.pdNatural Man page Source code
pdMatrix.pdSymm Man page Source code
pdMatrix.reStruct Man page Source code
pdNatural Man page
pdSymm Man page
phenoModel Man page Source code
plot.ACF Man page Source code
plot.Variogram Man page Source code
plot.augPred Man page Source code
plot.compareFits Man page Source code
plot.gls Man page Source code
plot.intervals.lmList Man page Source code
plot.lmList Man page Source code
plot.lme Man page
plot.nffGroupedData Man page Source code
plot.nfnGroupedData Man page Source code
plot.nls Man page Source code
plot.nmGroupedData Man page Source code
plot.pdMat Man page Source code
plot.ranef.lmList Man page Source code
plot.ranef.lme Man page Source code
plot.simulate.lme Man page Source code
pooledSD Man page Source code
predict.gls Man page Source code
predict.gnls Man page Source code
predict.lmList Man page Source code
predict.lme Man page Source code
predict.nlme Man page Source code
print.VarCorr.lme Man page Source code
print.VarCov Man page Source code
print.anova.lme Man page Source code
print.compareFits Man page Source code
print.corNatural Man page Source code
print.corStruct Source code
print.corSymm Source code
print.groupedData Source code
print.intervals.gls Man page Source code
print.intervals.lmList Man page Source code
print.intervals.lme Man page Source code
print.lmList Man page Source code
print.lme Source code
print.modelStruct Source code
print.pdMat Source code
print.ranef Man page
print.ranef.lme Man page Source code
print.reStruct Man page Source code
print.simulate.lme Man page Source code
print.summary.corNatural Source code
print.summary.corStruct Source code
print.summary.corSymm Source code
print.summary.gls Source code
print.summary.lmList Source code
print.summary.lme Man page Source code
print.summary.modelStruct Source code
print.summary.pdMat Man page Source code
print.summary.varComb Source code
print.summary.varFixed Source code
print.summary.varFunc Source code
print.varComb Man page Source code
print.varFunc Man page Source code
qqnorm.gls Man page
qqnorm.lm Man page
qqnorm.lmList Man page Source code
qqnorm.lme Man page Source code
qqnorm.nls Man page Source code
quinModel Man page Source code
random.effects Man page
random.effects.lmList Man page
random.effects.lme Man page
ranef Man page
ranef.lmList Man page
ranef.lme Man page
reStruct Man page Source code
recalc Man page
recalc.corAR1 Man page Source code
recalc.corARMA Man page Source code
recalc.corCAR1 Man page Source code
recalc.corCompSymm Man page Source code
recalc.corHF Man page
recalc.corIdent Man page Source code
recalc.corNatural Man page Source code
recalc.corSpatial Man page Source code
recalc.corStruct Man page Source code
recalc.corSymm Man page Source code
recalc.modelStruct Man page Source code
recalc.reStruct Man page Source code
recalc.varFunc Man page Source code
recalc.varIdent Man page Source code
residuals.gls Man page Source code
residuals.glsStruct Man page Source code
residuals.gnls Man page
residuals.gnlsStruct Man page Source code
residuals.lmList Man page Source code
residuals.lme Man page Source code
residuals.lmeStruct Man page Source code
residuals.nlmeStruct Man page Source code
sigma Man page
sigma.lmList Source code
sigma.lme Man page
simulate.lme Man page Source code
solve.pdBlocked Man page Source code
solve.pdDiag Man page Source code
solve.pdIdent Man page Source code
solve.pdLogChol Man page Source code
solve.pdMat Man page Source code
solve.pdNatural Man page Source code
solve.pdSymm Man page Source code
solve.reStruct Man page Source code
splitFormula Man page
summary.corAR1 Man page Source code
summary.corARMA Man page Source code
summary.corCAR1 Man page Source code
summary.corCompSymm Man page Source code
summary.corExp Man page Source code
summary.corGaus Man page Source code
summary.corIdent Man page Source code
summary.corLin Man page Source code
summary.corNatural Man page Source code
summary.corRatio Man page Source code
summary.corSpher Man page Source code
summary.corStruct Man page Source code
summary.corSymm Man page Source code
summary.gls Man page Source code
summary.lmList Man page Source code
summary.lme Man page Source code
summary.modelStruct Man page Source code
summary.nlsList Man page Source code
summary.pdBlocked Man page Source code
summary.pdCompSymm Man page Source code
summary.pdDiag Man page Source code
summary.pdIdent Man page Source code
summary.pdLogChol Man page Source code
summary.pdMat Man page Source code
summary.pdNatural Man page Source code
summary.pdSymm Man page Source code
summary.reStruct Man page Source code
summary.varComb Man page Source code
summary.varConstPower Man page Source code
summary.varExp Man page Source code
summary.varFixed Man page Source code
summary.varFunc Man page Source code
summary.varIdent Man page Source code
summary.varPower Man page Source code
svd.d Source code
terms.gls Source code
terms.lme Source code
update.corStruct Man page Source code
update.gls Man page Source code
update.gnls Man page Source code
update.groupedData Man page Source code
update.lmList Man page Source code
update.lme Man page Source code
update.modelStruct Man page Source code
update.nlme Source code
update.nlsList Man page Source code
update.reStruct Man page Source code
update.varComb Man page Source code
update.varConstPower Man page Source code
update.varExp Man page Source code
update.varExpon Man page
update.varFunc Man page Source code
update.varPower Man page Source code
varClasses Man page
varComb Man page
varConstPower Man page
varExp Man page Source code
varFixed Man page Source code
varFunc Man page
varIdent Man page Source code
varPower Man page Source code
varWeights Man page
varWeights.glsStruct Man page Source code
varWeights.lmeStruct Man page Source code
varWeights.varComb Man page Source code
varWeights.varFunc Man page Source code
vcov.gls Source code
vcov.lme Source code
warnErrList Source code
nlme documentation built on May 30, 2017, 3:12 a.m.