ODF2oce: Create ODF object from the output of 'ODF::read_ODF()'.

Description Usage Arguments Value Caution Author(s) See Also

View source: R/odf.R


As of August 11, 2015, ODF::read_ODF returns a list with 9 elements, one named DATA, which is a data.frame() containing the columnar data, the others being headers of various sorts. The present function constructs an oce object from such data, facilitating processing and plotting with the general oce functions. This involves storing the 8 headers verbatim in the odfHeaders in the metadata slot, and also copying some of the header information into more standard names (e.g. metadata@longitude is a copy of metadata@odfHeader$EVENT_HEADER$INITIAL_LATITUDE). As for the DATA, they are stored in the data slot, after renaming from ODF to oce convention using ODFNames2oceNames().


ODF2oce(ODF, coerce = TRUE, debug = getOption("oceDebug"))



A list as returned by read_ODF in the ODF package


A logical value indicating whether to coerce the return value to an appropriate object type, if possible.


a flag that turns on debugging. Set to 1 to get a moderate amount of debugging information, or to 2 to get more.


An oce object, possibly coerced to a subtype.


This function may change as the ODF package changes. Since ODF has not been released yet, this should not affect any users except those involved in the development of oce and ODF.


Dan Kelley

See Also

Other things related to odf data: CTD_BCD2014666_008_1_DN.ODF.gz, ODFListFromHeader(), ODFNames2oceNames(), [[,odf-method, [[<-,odf-method, odf-class, plot,odf-method, read.ctd.odf(), read.odf(), subset,odf-method, summary,odf-method

oce documentation built on Jan. 9, 2022, 1:06 a.m.