Files in pegas
Population and Evolutionary Genetics Analysis System
MD5
NEWS
NAMESPACE
DESCRIPTION
R/theta.R
R/R2.test.R
R/Fst.R
R/plotNetMDS.R
R/site.spectrum.R
R/VCFloci.R
R/summary.loci.R
R/conversion.R
R/heterozygosity.R
R/stairway.R
R/amova.R
R/sw.R
R/mjn.R
R/plot.loci.R
R/nuc.div.R
R/rr.test.R
R/geo.R
R/tajima.test.R
R/IO.R
R/options_themes_haploNet.R
R/zzz.R
R/F234.R
R/dist.asd.R
R/MMD.R
R/haplotype.R
R/allelicrichness.R
R/hw.test.R
src/Makevars
src/summary_loci_pegas.c
src/mst.c
src/pegas.c
src/readVCFbin.c
inst/CITATION
inst/doc/PlotHaploNet.R
inst/doc/ReadingFiles.pdf
inst/doc/PlotHaploNet.pdf
inst/doc/ReadingFiles.R
inst/doc/ReadingFiles.Rnw
inst/doc/PlotHaploNet.Rnw
build/vignette.rds
build/partial.rdb
vignettes/pegas.bib
vignettes/tyty
vignettes/titi
vignettes/tata
vignettes/tutu
vignettes/ape.sty
vignettes/ReadingFiles.Rnw
vignettes/PlotHaploNet.Rnw
vignettes/toto
data/jaguar.rda
man/theta.msat.Rd
man/replot.Rd
man/dist.hamming.Rd
man/F234.Rd
man/subset.haplotype.Rd
man/bind.loci.Rd
man/na.omit.loci.Rd
man/mjn.Rd
man/R2.test.Rd
man/hw.test.Rd
man/LDscan.Rd
man/site.spectrum.Rd
man/utilities.Rd
man/haploNet.Rd
man/nuc.div.Rd
man/haploFreq.Rd
man/LD.Rd
man/jaguar.Rd
man/allelicrichness.Rd
man/VCFloci.Rd
man/haplotype.loci.Rd
man/edit.loci.Rd
man/read.vcf.Rd
man/tajima.test.Rd
man/sw.Rd
man/cophenetic.haploNet.Rd
man/dist.asd.Rd
man/rr.test.Rd
man/all.equal.haploNet.Rd
man/read.loci.Rd
man/theta.h.Rd
man/by.loci.Rd
man/summary.loci.Rd
man/haplotype.Rd
man/mutations.Rd
man/amova.Rd
man/read.gtx.Rd
man/geoTrans.Rd
man/theta.k.Rd
man/hap.div.Rd
man/write.loci.Rd
man/pegas-package.Rd
man/diffHaplo.Rd
man/theta.tree.Rd
man/conversion.Rd
man/alleles2loci.Rd
man/options_themes_haploNet.Rd
man/stairway.Rd
man/theta.s.Rd
man/geod.Rd
man/Fst.Rd
man/MMD.Rd
man/mst.Rd
man/plotNetMDS.Rd
man/heterozygosity.Rd
