Compute the number of codon representations for a (vector of) peptide sequence(s)

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Description

use this function for only a few peptide sequences. Any larger number of peptide sequences should be dealt with in the framework of the library scheme and the detect function.

Usage

1
codons(x, libscheme, flag = FALSE)

Arguments

x

(vector) of character strings of peptide sequences.

libscheme

library scheme under which neighbors are being calculated. this is only of importance, if method="dna"

flag

internal use only: Set to true if calling this from another function

Value

vector of numbers of codons

Examples

1
2
codons("APE", libscheme="NNK")
codons("HENNING", libscheme="NNK")

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