Description Usage Arguments Value Examples
Calculate distribution of neighbors under library scheme lib for peptide sequences of length k.
1 | genNeighbors_reduced(sch, k)
|
sch |
library scheme |
k |
length of the peptide sequences |
dataset of peptide sequences: L are amino acid sequences, c0 are codons for self representation, cr is the ratio of #neighbors in first degree neighborhood (not counting self representations) and #codons in self representation N1 is the number of neighbors in codon representation (including self representation) s is the number of peptide sequences described by the label o is the number of peptide sequences reached by permutations
1 2 | genNeighbors_reduced(scheme("NNK"), 2)
genNeighbors_reduced(scheme("2020"), 2)
|
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.