Description Usage Arguments Value Examples

Calculate distribution of neighbors under library scheme lib for peptide sequences of length k.

1 | ```
genNeighbors(sch, k)
``` |

`sch` |
library scheme |

`k` |
length of the peptide sequences |

dataset of peptide sequences: AA are amino acid sequences, c0 are codons for self representation, cr is the ratio of #neighbors in first degree neighborhood (not counting self representations) and #codons in self representation N1 is the number of neighbors in codon representation (including self representation)

1 2 | ```
genNeighbors(scheme("NNK"), 2)
genNeighbors(scheme("2020"), 2)
``` |

peptider documentation built on May 29, 2017, 3:58 p.m.

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