assignPlatePosition: Assign an instrument queue configuration to a plate

In protViz: Visualizing and Analyzing Mass Spectrometry Related Data in Proteomics

Assign an instrument queue configuration to a plate

Description

The function implements a space-filling curve mapping 1D to 2D. This function aims to assign a sequence of samples to an instrument plate, e.g., 48 well plate 85.4x127.5mm.

Usage

assignPlatePosition(
  S,
  x = as.character(1:8),
  y = c("A", "B", "C", "D", "E", "F"),
  plate = 1:4,
  volume = 1,
  reserve = 46:48
)

Arguments

S	input data frame
x	a vector of possible x-coordinates of the plate
y	a vector of possible y-coordinates of the plate
plate	a vector of plates
volume	injection volume
reserve	block plate positions

Value

a data.frame

Examples

iris[c(1:15, 51:65, 101:115), ] |>
  blockRandom(x = "Species", check=FALSE) |>
  assignPlatePosition()

protViz documentation built on Feb. 16, 2023, 9:45 p.m.