ritis: Integrated Taxonomic Information System Client

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An interface to the Integrated Taxonomic Information System ('ITIS') (<https://www.itis.gov>). Includes functions to work with the 'ITIS' REST 'API' methods (<https://www.itis.gov/ws_description.html>), as well as the 'Solr' web service (<https://www.itis.gov/solr_documentation.html>).

Author
Scott Chamberlain [aut, cre]
Date of publication
2016-10-13 00:02:09
Maintainer
Scott Chamberlain <myrmecocystus@gmail.com>
License
MIT + file LICENSE
Version
0.5.4
URLs

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Man pages

accepted_names
Get accepted names from tsn
any_match_count
Get any match count.
comment_detail
Get comment detail from TSN
common_names
Get common names from tsn
core_metadata
Get core metadata from tsn
coverage
Get coverge from tsn
credibility
Get credibility rating from tsn
currency
Get currency from tsn
date_data
Get date data from tsn
description
Get description of the ITIS service
experts
Get expert information for the TSN.
full_record
Get full record from TSN or lsid
geographic_divisions
Get geographic divisions from tsn
geographic_values
Get all possible geographic values
global_species_completeness
Get global species completeness from tsn
hierarchy
Get hierarchy down from tsn
itis_facet
ITIS Solr facet
itis_group
ITIS Solr group search
itis_highlight
ITIS Solr highlight
itis_search
ITIS Solr search
jurisdiction
Get jurisdictional origin from tsn
kingdoms
Get kingdom names from tsn
last_change_date
Provides the date the ITIS database was last updated
lsid2tsn
Gets the TSN corresponding to the LSID, or an empty result if...
other_sources
Returns a list of the other sources used for the TSN.
parent_tsn
Returns the parent TSN for the entered TSN.
publications
Returns a list of the pulications used for the TSN.
rank_name
Returns the kingdom and rank information for the TSN.
rank_names
Provides a list of all the unique rank names contained in the...
record
Gets a record from an LSID
review_year
Returns the review year for the TSN.
ritis-package
Interface to Integrated Taxonomic Information (ITIS)
scientific_name
Returns the scientific name for the TSN. Also returns the...
search_anymatch
Search for any match
search_any_match_paged
Search for any matched page
search_common
Search for tsn by common name
search_scientific
Search by scientific name
solr
ITIS Solr Methods
synonym_names
Returns a list of the synonyms (if any) for the TSN.
taxon_authorship
Returns the author information for the TSN.
terms
Get ITIS terms, i.e., tsn's, authors, common names, and...
tsn2lsid
Gets the unique LSID for the TSN, or an empty result if there...
tsn_by_vernacular_language
Get tsn by vernacular language
unacceptability_reason
Returns the unacceptability reason, if any, for the TSN.
usage
Returns the usage information for the TSN.
vernacular_languages
Provides a list of the unique languages used in the...

Files in this package

ritis
ritis/inst
ritis/inst/doc
ritis/inst/doc/ritis_vignette.Rmd
ritis/inst/doc/ritis_vignette.html
ritis/inst/vign
ritis/inst/vign/ritis_vignette.Rmd
ritis/inst/vign/ritis_vignette.md
ritis/tests
ritis/tests/testthat
ritis/tests/testthat/test-jurisdiction.R
ritis/tests/testthat/test-itis_group.R
ritis/tests/testthat/test-itis_search.R
ritis/tests/testthat/test-hierarchy.R
ritis/tests/testthat/test-search_scientific.R
ritis/tests/testthat/test-search_common.R
ritis/tests/testthat/test-itis_highlight.R
ritis/tests/testthat/test-publications.R
ritis/tests/testthat/helper.R
ritis/tests/testthat/test-any_match_count.R
ritis/tests/testthat/test-record.R
ritis/tests/testthat/test-kingdoms.R
ritis/tests/testthat/test-itis_facet.R
ritis/tests/test-all.R
ritis/NAMESPACE
ritis/NEWS.md
ritis/R
ritis/R/search_any_match_paged.R
ritis/R/core_metadata.R
ritis/R/currency.R
ritis/R/last_change_date.R
ritis/R/solr.R
ritis/R/search_common.R
ritis/R/accepted_names.R
ritis/R/comment_detail.R
ritis/R/rank_name.R
ritis/R/vernacular_languages.R
ritis/R/any_match_count.R
ritis/R/common_names.R
ritis/R/taxon_authorship.R
ritis/R/other_sources.R
ritis/R/rank_names.R
ritis/R/global_species_completeness.R
ritis/R/usage.R
ritis/R/date_data.R
ritis/R/search_anymatch.R
ritis/R/scientific_name.R
ritis/R/parent_tsn.R
ritis/R/kingdoms.R
ritis/R/tsn_by_vernacular_language.R
ritis/R/coverage.R
ritis/R/description.R
ritis/R/jurisdiction.R
ritis/R/ritis-package.R
ritis/R/credibility.R
ritis/R/search_scientific.R
ritis/R/itis_search.R
ritis/R/unacceptability_reason.R
ritis/R/terms.R
ritis/R/review_year.R
ritis/R/tsn2lsid.R
ritis/R/hierarchy.R
ritis/R/geographic_values.R
ritis/R/publications.R
ritis/R/geographic_divisions.R
ritis/R/itis_highlight.R
ritis/R/itis_facet.R
ritis/R/lsid2tsn.R
ritis/R/experts.R
ritis/R/zzz.R
ritis/R/itis_group.R
ritis/R/record.R
ritis/R/full_record.R
ritis/R/synonym_names.R
ritis/vignettes
ritis/vignettes/ritis_vignette.Rmd
ritis/README.md
ritis/MD5
ritis/build
ritis/build/vignette.rds
ritis/DESCRIPTION
ritis/man
ritis/man/search_any_match_paged.Rd
ritis/man/itis_search.Rd
ritis/man/search_common.Rd
ritis/man/rank_names.Rd
ritis/man/description.Rd
ritis/man/taxon_authorship.Rd
ritis/man/ritis-package.Rd
ritis/man/parent_tsn.Rd
ritis/man/publications.Rd
ritis/man/geographic_divisions.Rd
ritis/man/comment_detail.Rd
ritis/man/credibility.Rd
ritis/man/lsid2tsn.Rd
ritis/man/date_data.Rd
ritis/man/vernacular_languages.Rd
ritis/man/solr.Rd
ritis/man/global_species_completeness.Rd
ritis/man/coverage.Rd
ritis/man/itis_group.Rd
ritis/man/unacceptability_reason.Rd
ritis/man/synonym_names.Rd
ritis/man/rank_name.Rd
ritis/man/hierarchy.Rd
ritis/man/other_sources.Rd
ritis/man/currency.Rd
ritis/man/record.Rd
ritis/man/accepted_names.Rd
ritis/man/tsn_by_vernacular_language.Rd
ritis/man/full_record.Rd
ritis/man/kingdoms.Rd
ritis/man/jurisdiction.Rd
ritis/man/experts.Rd
ritis/man/geographic_values.Rd
ritis/man/itis_highlight.Rd
ritis/man/core_metadata.Rd
ritis/man/search_anymatch.Rd
ritis/man/terms.Rd
ritis/man/last_change_date.Rd
ritis/man/any_match_count.Rd
ritis/man/usage.Rd
ritis/man/tsn2lsid.Rd
ritis/man/scientific_name.Rd
ritis/man/review_year.Rd
ritis/man/itis_facet.Rd
ritis/man/search_scientific.Rd
ritis/man/common_names.Rd
ritis/LICENSE