hierarchy: Get hierarchy down from tsn

In ritis: Integrated Taxonomic Information System Client

Description

Get hierarchy down from tsn

Usage

hierarchy_down(tsn, wt = "json", raw = FALSE, ...)

hierarchy_up(tsn, wt = "json", raw = FALSE, ...)

hierarchy_full(tsn, wt = "json", raw = FALSE, ...)

Arguments

tsn	TSN for a taxonomic group (numeric). Required.
wt	(character) One of "json" or "xml". Required.
raw	(logical) Return raw JSON or XML as character string. Required. Default: FALSE
...	curl options passed on to crul::HttpClient

Details

Hierarchy methods:

• hierarchy_down: Get hierarchy down from tsn

• hierarchy_up: Get hierarchy up from tsn

• hierarchy_full: Get full hierarchy from tsn

Examples

## Not run: 
## Full down (class Mammalia)
hierarchy_down(tsn=179913)

## Full up (genus Agoseris)
hierarchy_up(tsn=36485)

## Full hierarchy
### genus Liatris
hierarchy_full(tsn=37906)
### get raw data back
hierarchy_full(tsn=37906, raw = TRUE)
### genus Baetis, get xml back
hierarchy_full(100800, wt = "xml")

## End(Not run)

ritis documentation built on Feb. 2, 2021, 9:06 a.m.