obtain_coordiantes_for_anchorpoints_ks: Obtain Coordinates and Ks Values for Anchorpoints

In shinyWGD: 'Shiny' Application for Whole Genome Duplication Analysis

Obtain Coordinates and Ks Values for Anchorpoints

Description

This function extracts coordinates and Ks (synonymous substitution rate) values for anchorpoints from input data and merges them into a single output file.

Usage

obtain_coordiantes_for_anchorpoints_ks(
  anchorpoints,
  anchorpoints_ks,
  genes_file,
  out_file,
  out_ks_file,
  species
)

Arguments

anchorpoints	A character string specifying the file path for anchorpoints data.
anchorpoints_ks	A character string specifying the file path for anchorpoints Ks values data.
genes_file	A character string specifying the file path for genes information.
out_file	A character string specifying the output file path for coordinates.
out_ks_file	A character string specifying the output file path for Ks values.
species	A character string specifying the species name.

Value

NULL (output files are generated with the specified information).

shinyWGD documentation built on April 4, 2025, 2:28 a.m.