obtain_coordinates_for_segments_multiple: Obtain Coordinates for Segments in Multiple Synteny Blocks

In shinyWGD: 'Shiny' Application for Whole Genome Duplication Analysis

Obtain Coordinates for Segments in Multiple Synteny Blocks

Description

This function extracts coordinates for segments within multiple synteny blocks based on input dataframes.

Usage

obtain_coordinates_for_segments_multiple(seg_df, gff_df, input, out_file)

Arguments

seg_df	A dataframe containing information about synteny segments.
gff_df	A dataframe containing GFF (General Feature Format) information.
input	A list containing input data, typically multiple synteny query chromosomes.
out_file	A character string specifying the output file path.

Value

A dataframe with coordinates for segments within multiple synteny blocks.

shinyWGD documentation built on April 4, 2025, 2:28 a.m.