plot_rand_KLD: plot_rand_KLD

In singleCellHaystack: A Universal Differential Expression Prediction Tool for Single-Cell and Spatial Genomics Data

plot_rand_KLD

Description

Plots the distribution of randomized KLD for each of the genes, together with the mean and standard deviation, the 0.95 quantile and the 0.95 quantile from a normal distribution with mean and standard deviations from the distribution of KLDs. The logCV is indicated in the subtitle of each plot.

Usage

plot_rand_KLD(x, n = 12, log = TRUE, tail = FALSE)

Arguments

x	haystack result.
n	number of genes from randomization set to plot.
log	whether to use log of KLD.
tail	whether the genes are chosen from the tail of randomized genes.

singleCellHaystack documentation built on June 22, 2024, 11:57 a.m.