View source: R/haystack_continuous.R
get_D_KL_continuous_highD | R Documentation |
Calculates the Kullback-Leibler divergence between distributions for the high-dimensional continuous version of haystack.
get_D_KL_continuous_highD(
weights,
density.contributions,
reference.prob,
pseudo = 0
)
weights |
A numerical vector with expression values of a gene. |
density.contributions |
A matrix of density contributions of each cell (rows) to each center point (columns). |
reference.prob |
A reference distribution to calculate the divergence against. |
pseudo |
A pseudocount, used to avoid log(0) problems. |
A numerical value, the Kullback-Leibler divergence
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