read_fsa: Read fsa file
In trace: Tandem Repeat Analysis by Capillary Electrophoresis
read_fsa R Documentation
Read fsa file
Description
Read fsa file into memory and create fragments_trace object
Usage
read_fsa(files)
Arguments
files
a chr vector of fsa file names. For example, return all the fsa files in a directory with 'list.files("example_directory/", full.names = TRUE, pattern = ".fsa")'.
Details
read_fsa is just a wrapper around seqinr::read.abif() that reads the fsa file into memory and stores it inside a fragments_trace object. That enables you to use the next function find_ladders().
Value
A list of fragments_trace objects
See Also
find_ladders(), plot_data_channels()
Examples
fsa_file <- read_fsa(system.file("abif/2_FAC321_0000205983_B02_004.fsa", package = "seqinr"))
plot_data_channels(fsa_file)
trace documentation built on April 4, 2025, 1:50 a.m.
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| read_fsa | R Documentation |
Read fsa file
Description
Read fsa file into memory and create fragments_trace object
Usage
read_fsa(files)
Arguments
files |
a chr vector of fsa file names. For example, return all the fsa files in a directory with 'list.files("example_directory/", full.names = TRUE, pattern = ".fsa")'. |
Details
read_fsa is just a wrapper around seqinr::read.abif() that reads the fsa file into memory and stores it inside a fragments_trace object. That enables you to use the next function find_ladders().
Value
A list of fragments_trace objects
See Also
find_ladders(), plot_data_channels()
Examples
fsa_file <- read_fsa(system.file("abif/2_FAC321_0000205983_B02_004.fsa", package = "seqinr"))
plot_data_channels(fsa_file)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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