rmOtherSlt: Remove a user-defined slot

In treeman: Phylogenetic Tree Manipulation Class and Methods

Description

Returns a tree with a user-defined tree slot removed.

Usage

rmOtherSlt(tree, slt_nm)

Arguments

tree	TreeMan object
slt_nm	name of slot to be removed

Details

A user can specify a new slot using the setNdSlt() function or upon reading a tree. This can be removed using this function by specifying the name of the slot to be removed.

See Also

setNdOther, setNdsOther, https://github.com/DomBennett/treeman/wiki/set-methods

Examples

library(treeman)
tree <- randTree(10)
vals <- runif(min=0, max=1, n=tree['nall'])
tree <- setNdsOther(tree, tree['all'], vals, 'confidence')
tree <- updateSlts(tree)
summary(tree)
tree <- rmOtherSlt(tree, 'confidence')
tree <- updateSlts(tree)
summary(tree)

treeman documentation built on July 8, 2020, 7:28 p.m.