downsample_pcs: Downsample PCs for use in integration metric calculations
In AlexsLemonade/scpcaTools: Single cell data tools for ScPCA
View source: R/processing_pcs.R
downsample_pcs R Documentation
Downsample PCs for use in integration metric calculations
Description
Downsample PCs for use in integration metric calculations
Usage
downsample_pcs(pcs, frac_cells, min_cells = 50)
Arguments
pcs
The PCs to downsample, these PCs should contain batch labels as rownames
frac_cells
The fraction of cells to downsample to
min_cells
The minimum number of cells after downsampling. Default: 50
Value
The downsampled PCs
AlexsLemonade/scpcaTools documentation built on July 12, 2024, 8:34 a.m.
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View source: R/processing_pcs.R
| downsample_pcs | R Documentation |
Downsample PCs for use in integration metric calculations
Description
Downsample PCs for use in integration metric calculations
Usage
downsample_pcs(pcs, frac_cells, min_cells = 50)
Arguments
pcs |
The PCs to downsample, these PCs should contain batch labels as rownames |
frac_cells |
The fraction of cells to downsample to |
min_cells |
The minimum number of cells after downsampling. Default: 50 |
Value
The downsampled PCs
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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