miQC_nofilter: miQC_nofilter
In AlexsLemonade/scpcaTools: Single cell data tools for ScPCA
miQC_nofilter R Documentation
miQC_nofilter
Description
Add statistics from miQC without filtering.
Derived from miQC::filterCells
https://github.com/greenelab/miQC/blob/main/R/filterCells.R
Copyright (c) 2021, Greene Laboratory
Usage
miQC_nofilter(sce, model = NULL)
Arguments
sce
(SingleCellExperiment) Input data object.
model
(flexmix) Output of mixtureModel function, which should be
explicitly called first to ensure stability of model parameters.
Default = NULL.
Value
Returns a SingleCellExperiment object, the same as the input except
with a new column in colData, prob_compromised.
AlexsLemonade/scpcaTools documentation built on July 12, 2024, 8:34 a.m.
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| miQC_nofilter | R Documentation |
miQC_nofilter
Description
Add statistics from miQC without filtering. Derived from miQC::filterCells https://github.com/greenelab/miQC/blob/main/R/filterCells.R Copyright (c) 2021, Greene Laboratory
Usage
miQC_nofilter(sce, model = NULL)
Arguments
sce |
(SingleCellExperiment) Input data object. |
model |
(flexmix) Output of mixtureModel function, which should be explicitly called first to ensure stability of model parameters. Default = NULL. |
Value
Returns a SingleCellExperiment object, the same as the input except with a new column in colData, prob_compromised.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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