prepare_merged_metadata: Prepare an updated list of metadata for the merged SCE
In AlexsLemonade/scpcaTools: Single cell data tools for ScPCA
View source: R/merge_sce_list.R
prepare_merged_metadata R Documentation
Prepare an updated list of metadata for the merged SCE
Description
The metadata will be reformatted to contain the following fields:
- 'library_id': vector of all library ids in the merged object
- 'sample_id': vector of all sample ids in the merged object
- 'library_metadata': pre-merge metadata list for each library, named by SCE name
- 'sample_metadata': a data frame with all distinct rows from the pre-merge sample_metadata data frames,
with all values coerced to character
Usage
prepare_merged_metadata(metadata_list)
Arguments
metadata_list
List of metadata to update
Value
Updated metadata list to include in the merged SCE
AlexsLemonade/scpcaTools documentation built on July 12, 2024, 8:34 a.m.
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View source: R/merge_sce_list.R
| prepare_merged_metadata | R Documentation |
Prepare an updated list of metadata for the merged SCE
Description
The metadata will be reformatted to contain the following fields: - 'library_id': vector of all library ids in the merged object - 'sample_id': vector of all sample ids in the merged object - 'library_metadata': pre-merge metadata list for each library, named by SCE name - 'sample_metadata': a data frame with all distinct rows from the pre-merge sample_metadata data frames, with all values coerced to character
Usage
prepare_merged_metadata(metadata_list)
Arguments
metadata_list |
List of metadata to update |
Value
Updated metadata list to include in the merged SCE
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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