metadata_to_coldata: Add sample metadata to colData of SCE object
In AlexsLemonade/scpcaTools: Single cell data tools for ScPCA
View source: R/metadata_to_coldata.R
metadata_to_coldata R Documentation
Add sample metadata to colData of SCE object
Description
Add sample metadata to colData of SCE object
Usage
metadata_to_coldata(sce, join_columns = "library_id")
Arguments
sce
SingleCellExperiment object to add sample metadata to colData.
Must contain the 'batch_column' as a column in 'colData'.
join_columns
A character vector giving the name(s) of the column(s) in colData
to use for joining with the 'sample_metadata'. Default is 'library_id'
Value
SingleCellExperiment object with the contents of 'metadata(sce)$sample_metadata'
added as new columns to the 'colData(sce)'.
AlexsLemonade/scpcaTools documentation built on July 12, 2024, 8:34 a.m.
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View source: R/metadata_to_coldata.R
| metadata_to_coldata | R Documentation |
Add sample metadata to colData of SCE object
Description
Add sample metadata to colData of SCE object
Usage
metadata_to_coldata(sce, join_columns = "library_id")
Arguments
sce |
SingleCellExperiment object to add sample metadata to colData. Must contain the 'batch_column' as a column in 'colData'. |
join_columns |
A character vector giving the name(s) of the column(s) in colData to use for joining with the 'sample_metadata'. Default is 'library_id' |
Value
SingleCellExperiment object with the contents of 'metadata(sce)$sample_metadata' added as new columns to the 'colData(sce)'.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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