combine_group_GRanges: Combine individual GRanges from a list of GRanges objects...
In AllenInstitute/lowcat: Low Coverage Accessibility and Transcriptomics
Description
Usage
Arguments
Value
View source: R/genomic_ranges.R
Description
This is useful for making combined objects at the level of subclasses, clusters, or
other annotations for analysis within R.
Usage
1
combine_group_GRanges(fragment_list, samples, group_col)
Arguments
fragment_list
a list of GRanges objects, each named by sample_id
samples
a sample meatdata data.frame with a column called sample_id and other columns
to be used for grouping.
group_col
The column of the samples data.frame with group assignments.
Value
A list of GRanges objects, one for each unique value in group_col.
AllenInstitute/lowcat documentation built on Oct. 30, 2019, 4:45 a.m.
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Description Usage Arguments Value
View source: R/genomic_ranges.R
Description
This is useful for making combined objects at the level of subclasses, clusters, or other annotations for analysis within R.
Usage
1 | combine_group_GRanges(fragment_list, samples, group_col)
|
Arguments
fragment_list |
a list of GRanges objects, each named by sample_id |
samples |
a sample meatdata data.frame with a column called sample_id and other columns to be used for grouping. |
group_col |
The column of the samples data.frame with group assignments. |
Value
A list of GRanges objects, one for each unique value in group_col.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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