run_pe_to_frag_parallel: Read paired-end BAM files to GenomicRanges objects in...
In AllenInstitute/lowcat: Low Coverage Accessibility and Transcriptomics
Description
Usage
Arguments
Value
View source: R/io_and_formats.R
Description
Read paired-end BAM files to GenomicRanges objects in parallel
Usage
1
run_pe_to_frag_parallel(bam_files, sample_names = NULL, n_cores = 6)
Arguments
bam_files
a vector of bam file locations
sample_names
Sample names. If NULL, will use BAM file names.
n_cores
The number of cores to use in parallel. Use "auto" to detect and use all cores. Default is 6.
Value
a list of GenomicRanges objects
AllenInstitute/lowcat documentation built on Oct. 30, 2019, 4:45 a.m.
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Description Usage Arguments Value
View source: R/io_and_formats.R
Description
Read paired-end BAM files to GenomicRanges objects in parallel
Usage
1 | run_pe_to_frag_parallel(bam_files, sample_names = NULL, n_cores = 6)
|
Arguments
bam_files |
a vector of bam file locations |
sample_names |
Sample names. If NULL, will use BAM file names. |
n_cores |
The number of cores to use in parallel. Use "auto" to detect and use all cores. Default is 6. |
Value
a list of GenomicRanges objects
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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