Files in AndersenLab/easyXpress
A Package to Read, Process, and Analyze Worm Data Generated from CellProfiler’s WormToolbox

.Rbuildignore

.github/.gitignore

.github/workflows/build_docker.yml

.github/workflows/pkgdown.yaml

.gitignore

DESCRIPTION

LICENSE

NAMESPACE

R/Xpress.R R/checkBalance.R R/checkEff.R R/checkModels.R R/checkOF.R R/checkObjs.R R/checkWF.R R/classifierOF.R R/clusterOF.R R/data.R R/delta.R R/easyXpress-package.R R/edgeFlag.R R/edgeOF.R R/filterOF.R R/filterWF.R R/globals.R R/iqrOutlier.R R/makeDesign.R R/modelSelection.R R/nWF.R R/outlierOF.R R/outlierWF.R R/plateThumbs.R R/process.R R/readXpress.R R/regEff.R R/sdOutlier.R R/setFlags.R R/setOF.R R/setWF.R R/summarizeWells.R R/tidyImages.R R/tidyProject.R R/titerWF.R R/userOF.R R/userWF.R R/viewDose.R R/viewOverlay.R R/viewPlate.R R/viewWell.R R/wellThumbs.R README.md

_pkgdown.yml

data/gbm2x.rda

data/model_select_1.rda

data/model_select_2.rda

data/model_select_3.rda

data/model_select_4.rda

docs/404.html

docs/LICENSE-text.html

docs/apple-touch-icon-120x120.png

docs/apple-touch-icon-152x152.png

docs/apple-touch-icon-180x180.png

docs/apple-touch-icon-60x60.png

docs/apple-touch-icon-76x76.png

docs/apple-touch-icon.png

docs/articles/Dose_Response.html

docs/articles/Dose_Response_files/figure-html/unnamed-chunk-10-1.png

docs/articles/Dose_Response_files/figure-html/unnamed-chunk-13-1.png

docs/articles/Dose_Response_files/figure-html/unnamed-chunk-14-1.png

docs/articles/Dose_Response_files/figure-html/unnamed-chunk-19-1.png

docs/articles/Dose_Response_files/figure-html/unnamed-chunk-20-1.png

docs/articles/Dose_Response_files/figure-html/unnamed-chunk-22-1.png

docs/articles/Dose_Response_files/figure-html/unnamed-chunk-24-1.png

docs/articles/Dose_Response_files/figure-html/unnamed-chunk-25-1.png

docs/articles/Dose_Response_files/figure-html/unnamed-chunk-26-1.png

docs/articles/Dose_Response_files/figure-html/unnamed-chunk-27-1.png

docs/articles/Dose_Response_files/figure-html/unnamed-chunk-6-1.png

docs/articles/Dose_Response_files/figure-html/unnamed-chunk-7-1.png

docs/articles/articles/Dose_Response.html

docs/articles/checkModels_ex_anno.png

docs/articles/easyXpress.html

docs/articles/easyXpress_files/crosstalk-1.2.0/css/crosstalk.min.css

docs/articles/easyXpress_files/crosstalk-1.2.0/js/crosstalk.js

docs/articles/easyXpress_files/crosstalk-1.2.0/js/crosstalk.js.map

docs/articles/easyXpress_files/crosstalk-1.2.0/js/crosstalk.min.js

docs/articles/easyXpress_files/crosstalk-1.2.0/js/crosstalk.min.js.map

docs/articles/easyXpress_files/crosstalk-1.2.0/scss/crosstalk.scss

docs/articles/easyXpress_files/figure-html/unnamed-chunk-13-1.png

docs/articles/easyXpress_files/figure-html/unnamed-chunk-15-1.png

docs/articles/easyXpress_files/htmlwidgets-1.5.4/htmlwidgets.js

docs/articles/easyXpress_files/plotly-binding-4.10.0/plotly.js

docs/articles/easyXpress_files/plotly-htmlwidgets-css-2.5.1/plotly-htmlwidgets.css

docs/articles/easyXpress_files/plotly-main-2.5.1/plotly-latest.min.js

docs/articles/easyXpress_files/typedarray-0.1/typedarray.min.js

docs/articles/index.html

docs/articles/viewOverlay.png

docs/authors.html

docs/deps/bootstrap-5.1.0/bootstrap.bundle.min.js

docs/deps/bootstrap-5.1.0/bootstrap.bundle.min.js.map

docs/deps/bootstrap-5.1.0/bootstrap.min.css

docs/deps/data-deps.txt

docs/deps/jquery-3.6.0/jquery-3.6.0.js

docs/deps/jquery-3.6.0/jquery-3.6.0.min.js

docs/deps/jquery-3.6.0/jquery-3.6.0.min.map

docs/favicon-16x16.png

docs/favicon-32x32.png

docs/favicon.ico

docs/index.html

docs/link.svg

docs/logo.png

docs/pkgdown.js

docs/pkgdown.yml

docs/reference/Xpress.html

docs/reference/checkBalance.html

docs/reference/checkEff.html

docs/reference/checkModels.html

docs/reference/checkOF.html

docs/reference/checkObjs.html

docs/reference/checkWF.html

docs/reference/classifierOF.html

docs/reference/clusterOF.html

docs/reference/delta.html

docs/reference/easyXpress-package.html

docs/reference/edgeFlag.html

docs/reference/edgeOF.html

docs/reference/figures/Overview.png

docs/reference/figures/logo.png

docs/reference/filterOF.html

docs/reference/filterWF.html

docs/reference/gbm2x.html

docs/reference/index.html

docs/reference/iqrOutlier.html

docs/reference/makeDesign.html

docs/reference/modelSelection.html

docs/reference/model_select_1.html

docs/reference/model_select_2.html

docs/reference/model_select_3.html

docs/reference/model_select_4.html

docs/reference/nWF.html

docs/reference/outlierOF.html

docs/reference/outlierWF.html

docs/reference/plateThumbs.html

docs/reference/process.html

docs/reference/readXpress.html

docs/reference/regEff.html

docs/reference/sdOutlier.html

docs/reference/setFlags.html

docs/reference/setOF.html

docs/reference/setWF.html

docs/reference/summarizeWells.html

docs/reference/tidyImages.html

docs/reference/tidyProject.html

docs/reference/titerWF.html

docs/reference/userOF.html

docs/reference/userWF.html

docs/reference/viewDose.html

docs/reference/viewOverlay.html

docs/reference/viewPlate.html

docs/reference/viewWell.html

docs/reference/wellThumbs.html

docs/search.json

docs/sitemap.xml

easyXpress.Rproj

env/.Rprofile

env/Dockerfile

env/rstudio-prefs.json

man/Xpress.Rd man/checkBalance.Rd man/checkEff.Rd man/checkModels.Rd man/checkOF.Rd man/checkObjs.Rd man/checkWF.Rd man/classifierOF.Rd man/clusterOF.Rd man/delta.Rd man/easyXpress-package.Rd man/edgeFlag.Rd man/edgeOF.Rd

man/figures/Overview.png

man/figures/logo.png

man/filterOF.Rd man/filterWF.Rd man/gbm2x.Rd man/iqrOutlier.Rd man/makeDesign.Rd man/modelSelection.Rd man/model_select_1.Rd man/model_select_2.Rd man/model_select_3.Rd man/model_select_4.Rd man/nWF.Rd man/outlierOF.Rd man/outlierWF.Rd man/plateThumbs.Rd man/process.Rd man/readXpress.Rd man/regEff.Rd man/sdOutlier.Rd man/setFlags.Rd man/setOF.Rd man/setWF.Rd man/summarizeWells.Rd man/tidyImages.Rd man/tidyProject.Rd man/titerWF.Rd man/userOF.Rd man/userWF.Rd man/viewDose.Rd man/viewOverlay.Rd man/viewPlate.Rd man/viewWell.Rd man/wellThumbs.Rd

pkgdown/favicon/apple-touch-icon-120x120.png

pkgdown/favicon/apple-touch-icon-152x152.png

pkgdown/favicon/apple-touch-icon-180x180.png

pkgdown/favicon/apple-touch-icon-60x60.png

pkgdown/favicon/apple-touch-icon-76x76.png

pkgdown/favicon/apple-touch-icon.png

pkgdown/favicon/favicon-16x16.png

pkgdown/favicon/favicon-32x32.png

pkgdown/favicon/favicon.ico

vignettes/.gitignore

vignettes/articles/.Rmd vignettes/articles/Dose_Response.Rmd

vignettes/articles/checkModels_ex_anno.png

vignettes/articles/viewOverlay.png

vignettes/easyXpress.R vignettes/easyXpress.Rmd

vignettes/easyXpress.html

vignettes/example_data/ProcessedImages/20191119-growth-p05-m2X_C03_overlay.png

vignettes/example_data/ProcessedImages/20191119-growth-p06-m2X_C09_overlay.png

vignettes/example_data/ProcessedImages/20191119-growth-p09-m2X_C06_overlay.png

vignettes/example_data/ProcessedImages/20191119-growth-p11-m2X_C03_overlay.png

vignettes/example_data/ProcessedImages/20191119-growth-p13-m2X_C08_overlay.png

vignettes/example_data/ProcessedImages/20191119-growth-p22-m2X_C07_overlay.png

vignettes/example_data/ProcessedImages/20191119-growth-p25-m2X_C04_overlay.png

vignettes/example_data/ProcessedImages/20191119-growth-p28-m2X_C01_overlay.png

vignettes/example_data/ProcessedImages/20191119-growth-p32-m2X_C05_overlay.png

vignettes/example_data/ProcessedImages/20191119-growth-p35-m2X_C04_overlay.png

vignettes/example_data/ProcessedImages/20191119-growth-p39-m2X_C09_overlay.png

vignettes/example_data/ProcessedImages/20191119-growth-p41-m2X_C01_overlay.png

vignettes/example_data/ProcessedImages/20191119-growth-p45-m2X_C11_overlay.png

vignettes/example_data/ProcessedImages/20191119-growth-p46-m2X_C01_overlay.png

vignettes/example_data/ProcessedImages/20191119-growth-p48-m2X_C03_overlay.png

vignettes/example_data/ProcessedImages/20191119-growth-p50-m2X_C02_overlay.png

vignettes/example_data/ProcessedImages/20191119-growth-p55-m2X_C05_overlay.png

vignettes/example_data/ProcessedImages/20191119-growth-p57-m2X_C07_overlay.png

vignettes/example_data/ProcessedImages/20191119-growth-p61-m2X_C02_overlay.png

vignettes/example_data/ProcessedImages/20191119-growth-p63-m2X_C03_overlay.png

vignettes/example_data/ProcessedImages/20200711-toxin09A-p13-m2X_G01_overlay.png

vignettes/example_data/ProcessedImages/20200711-toxin09A-p13-m2X_G03_overlay.png

vignettes/example_data/ProcessedImages/20200711-toxin09A-p13-m2X_G05_overlay.png

vignettes/example_data/ProcessedImages/20200711-toxin09A-p13-m2X_G07_overlay.png

vignettes/example_data/ProcessedImages/20200711-toxin09A-p13-m2X_G09_overlay.png

vignettes/example_data/ProcessedImages/20200711-toxin09A-p13-m2X_G11_overlay.png

vignettes/example_data/cp_data/CellProfiler-Analysis_20191119_example_data.RData

vignettes/example_data/cp_data/processed_dose_data.RData

vignettes/example_data/cp_data/processed_plate_data.RData

AndersenLab/easyXpress documentation built on Dec. 6, 2024, 4:04 a.m.

rdrr.io home R language documentation Run R code online

CRAN packages Bioconductor packages R-Forge packages GitHub packages

Note that we can't provide technical support on individual packages. You should contact the package authors for that.

AndersenLab/easyXpress
A Package to Read, Process, and Analyze Worm Data Generated from CellProfiler’s WormToolbox

Files in AndersenLab/easyXpress
A Package to Read, Process, and Analyze Worm Data Generated from CellProfiler’s WormToolbox

R Package Documentation

Browse R Packages

We want your feedback!

AndersenLab/easyXpress A Package to Read, Process, and Analyze Worm Data Generated from CellProfiler’s WormToolbox

Files in AndersenLab/easyXpress A Package to Read, Process, and Analyze Worm Data Generated from CellProfiler’s WormToolbox

R Package Documentation

Browse R Packages

We want your feedback!

AndersenLab/easyXpress
A Package to Read, Process, and Analyze Worm Data Generated from CellProfiler’s WormToolbox

Files in AndersenLab/easyXpress
A Package to Read, Process, and Analyze Worm Data Generated from CellProfiler’s WormToolbox