viewDose: viewDose
In AndersenLab/easyXpress: A Package to Read, Process, and Analyze Worm Data Generated from CellProfiler’s WormToolbox
viewDose R Documentation
viewDose
Description
#'viewDose plots representative processed well images
with object centroids colored by type for each concentration
of a drug.
Usage
viewDose(data, strain_name, drug_name, proc_img_dir)
Arguments
data
Unsummarised CellProfiler data output from the
Xpress functon. Either the raw or processed data can be viewed.
strain_name
A character value for the strain to use in
the plots, e.g. "N2".
drug_name
A character value for the drug to use in
the plots, e.g. "paraquat".
proc_img_dir
The full path of the directory holding
the processed images.
Value
A ggplot object with representative wells for each dose
of the selected drug and strain. The user cannot specify the
individual wells to be used. To view the results for a specific
well use the viewWell function.
AndersenLab/easyXpress documentation built on Dec. 6, 2024, 4:04 a.m.
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| viewDose | R Documentation |
viewDose
Description
#'viewDose plots representative processed well images
with object centroids colored by type for each concentration
of a drug.
Usage
viewDose(data, strain_name, drug_name, proc_img_dir)
Arguments
data |
Unsummarised CellProfiler data output from the
|
strain_name |
A character value for the strain to use in
the plots, e.g. |
drug_name |
A character value for the drug to use in
the plots, e.g. |
proc_img_dir |
The full path of the directory holding the processed images. |
Value
A ggplot object with representative wells for each dose
of the selected drug and strain. The user cannot specify the
individual wells to be used. To view the results for a specific
well use the viewWell function.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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