tx_extend_UTR: Extending GRanges 5' and 3' UTR blocks
In AngelCampos/txtools: An R package facilitating analysis of RNA modifications, structures, and interactions
tx_extend_UTR R Documentation
Extending GRanges 5' and 3' UTR blocks
Description
A function that extends the 5' and/or 3' UTR regions of GRanges including the
'blocks' column, which defines the exon structure of a transcript.
As those loaded by ´tx_load_bed()´.
Usage
tx_extend_UTR(GR, ext_5p = 0, ext_3p = 0)
Arguments
GR
GRanges GRanges containing a blocks
ext_5p
integer Number of bp for the 5' UTR blocks to be extended
ext_3p
integer Number of bp for the 3' UTR blocks to be extended
Value
GRanges
AngelCampos/txtools documentation built on April 8, 2024, 6:06 p.m.
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| tx_extend_UTR | R Documentation |
Extending GRanges 5' and 3' UTR blocks
Description
A function that extends the 5' and/or 3' UTR regions of GRanges including the 'blocks' column, which defines the exon structure of a transcript. As those loaded by ´tx_load_bed()´.
Usage
tx_extend_UTR(GR, ext_5p = 0, ext_3p = 0)
Arguments
GR |
GRanges GRanges containing a blocks |
ext_5p |
integer Number of bp for the 5' UTR blocks to be extended |
ext_3p |
integer Number of bp for the 3' UTR blocks to be extended |
Value
GRanges
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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