tx_test_LRTedgeR: Likelihood Ratio Test

In AngelCampos/txtools: An R package facilitating analysis of RNA modifications, structures, and interactions

Likelihood Ratio Test

Description

Likelihood Ratio Test

Usage

tx_test_LRTedgeR(DTL, tVar, sVar, test_groups, minTrials = 50)

Arguments

DTL	list. List of txDT, into which each element represents a replicate of an experimental dataset.
tVar	character. Variable that represents number of trials, e.g. coverage
sVar	character. Variable that represents number of successes, e.g. start_5p
test_groups	factor. Factor specifying the "WT" and "KO" samples.
minTrials	integer. Minimum number of trials in position to be considered in the statistical testing.

Value

data.table

AngelCampos/txtools documentation built on Sept. 16, 2024, 10:25 p.m.