tx_unifyTxDTL: Unify lists of txDTs
In AngelCampos/txtools: An R package facilitating analysis of RNA modifications, structures, and interactions
tx_unifyTxDTL R Documentation
Unify lists of txDTs
Description
Unify lists of txDTs
Usage
tx_unifyTxDTL(
txDTL,
geneAnnot = NULL,
genome = NULL,
type = "intersection",
nCores = 1
)
Arguments
txDTL
list. A list of txDTs
geneAnnot
GRanges. Gene annotation as loaded by tx_load_bed().
genome
list. The full reference genome sequences, as loaded by
tx_load_genome() or prepackaged by BSgenome, see ?BSgenome::available.genomes
type
character. Set function to apply to genes in the list of txDTs, either
'union' or 'intersection'.
nCores
integer. Number of cores to run the function with. Multicore
capability not available in Windows OS.
Value
list
AngelCampos/txtools documentation built on Sept. 16, 2024, 10:25 p.m.
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| tx_unifyTxDTL | R Documentation |
Unify lists of txDTs
Description
Unify lists of txDTs
Usage
tx_unifyTxDTL(
txDTL,
geneAnnot = NULL,
genome = NULL,
type = "intersection",
nCores = 1
)
Arguments
txDTL |
list. A list of txDTs |
geneAnnot |
GRanges. Gene annotation as loaded by |
genome |
list. The full reference genome sequences, as loaded by
|
type |
character. Set function to apply to genes in the list of txDTs, either 'union' or 'intersection'. |
nCores |
integer. Number of cores to run the function with. Multicore capability not available in Windows OS. |
Value
list
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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