add_cov: Add coverage tracks to Sample Sheet

View source: R/coverage_managment.r

add_covR Documentation

Add coverage tracks to Sample Sheet

Description

Add coverage tracks to Sample Sheet

Usage

add_cov(SCAR_obj, alignment_dir, comp_op = NA, compare = NA)

Arguments

SCAR_obj

SCAR object.

alignment_dir

Directory of aligned reads.

comp_op

Operation for bamCompare

compare

Designation to add comp or regular cov to sample list


Bankso/SCAR documentation built on Aug. 20, 2022, 5:26 a.m.