tmt10Channels: helper function to generate the a data.frame of TMT knockout...
In BenBruyneel/proteinDiscover: ProteinDiscover
tmt10Channels R Documentation
helper function to generate the a data.frame of TMT knockout strain (TKO)
info for other functions. This function generates a data.frame based on
the 10-plex TMT TKO knockout (this was the original TMT-knockout-digest
available)
Description
helper function to generate the a data.frame of TMT knockout strain (TKO)
info for other functions. This function generates a data.frame based on
the 10-plex TMT TKO knockout (this was the original TMT-knockout-digest
available)
Usage
tmt10Channels()
Value
a data.frame with four columns: all are character vectors
Note
the rows define the order of the abundance (etc) columns in the
protein, peptide and psms table in a pdResult file. The order is
alphabetical in protein & peptide tables, but not in the psms tables: there
it is based based on the order of the isotopes
psmsChannels & isotopeChannels columns match each other
BenBruyneel/proteinDiscover documentation built on March 16, 2024, 4:36 p.m.
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| tmt10Channels | R Documentation |
helper function to generate the a data.frame of TMT knockout strain (TKO) info for other functions. This function generates a data.frame based on the 10-plex TMT TKO knockout (this was the original TMT-knockout-digest available)
Description
helper function to generate the a data.frame of TMT knockout strain (TKO) info for other functions. This function generates a data.frame based on the 10-plex TMT TKO knockout (this was the original TMT-knockout-digest available)
Usage
tmt10Channels()
Value
a data.frame with four columns: all are character vectors
Note
the rows define the order of the abundance (etc) columns in the protein, peptide and psms table in a pdResult file. The order is alphabetical in protein & peptide tables, but not in the psms tables: there it is based based on the order of the isotopes
psmsChannels & isotopeChannels columns match each other
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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