create_merged_data: Create merged data
In Bio-Core/BioCore.Annotation: BioCore Variant Annotation Package
Description
Usage
Arguments
Value
Author(s)
View source: R/create_merged_data.R
Description
A function that imports ANNOVAR annotated SNV files from the BioCore pipeline.
Usage
1
create_merged_data(path = NULL, pattern = ".hg19_multianno.txt", colheader = get_annovar_colnames())
Arguments
path
full path to the ANNOVAR annotated SNV files (required)
pattern
suffix pattern to search in the directory (default: .hg19_multianno.txt)
colheader
list of column names
Value
Returns a dataframe containing merged SNV data from a cohort of samples.
Author(s)
Richard J. de Borja
Bio-Core/BioCore.Annotation documentation built on Feb. 3, 2020, 6:01 p.m.
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Description Usage Arguments Value Author(s)
View source: R/create_merged_data.R
Description
A function that imports ANNOVAR annotated SNV files from the BioCore pipeline.
Usage
1 | create_merged_data(path = NULL, pattern = ".hg19_multianno.txt", colheader = get_annovar_colnames())
|
Arguments
path |
full path to the ANNOVAR annotated SNV files (required) |
pattern |
suffix pattern to search in the directory (default: .hg19_multianno.txt) |
colheader |
list of column names |
Value
Returns a dataframe containing merged SNV data from a cohort of samples.
Author(s)
Richard J. de Borja
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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