add_peptide_positions: Add a column describing the position(s) of the peptide...
In CambridgeCentreForProteomics/camprotR: Processing, analysing and visualising CCP proteomics data
add_peptide_positions R Documentation
Add a column describing the position(s) of the peptide sequence with respect
to the protein
Description
Identify the position(s) of the peptide sequence in the protein.
Where a sequence has multiple master proteins, the peptide position is
undefined (NA).
Usage
add_peptide_positions(
obj,
proteome_fasta,
master_protein_col = "Master.Protein.Accessions"
)
Arguments
obj
data.frame with PD output at PSM/peptide level
proteome_fasta
character Filepath for proteome fasta
master_protein_col
character Column name for master protein
Value
data.frame
CambridgeCentreForProteomics/camprotR documentation built on July 7, 2024, 2:13 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| add_peptide_positions | R Documentation |
Add a column describing the position(s) of the peptide sequence with respect to the protein
Description
Identify the position(s) of the peptide sequence in the protein. Where a sequence has multiple master proteins, the peptide position is undefined (NA).
Usage
add_peptide_positions(
obj,
proteome_fasta,
master_protein_col = "Master.Protein.Accessions"
)
Arguments
obj |
|
proteome_fasta |
|
master_protein_col |
|
Value
data.frame
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.