get_all_mappings: Get all mappings for GO terms
In CambridgeCentreForProteomics/camprotR: Processing, analysing and visualising CCP proteomics data
get_all_mappings R Documentation
Get all mappings for GO terms
Description
For a vector of GO terms, obtain all of the ancestor or offspring terms.
Usage
get_all_mappings(go_ids, ontologies, verbose = TRUE, direction = "ancestor")
Arguments
go_ids
character vector. GO terms to use in the format GO:1234567.
ontologies
named character vector. Names = go_ids and values =
ontologies e.g. BP, CC, or MF.
verbose
logical.
direction
string Either "ancestor" or "offspring".
Value
Returns a named list of character vectors. Names == GO terms and
values == vectors containing all ancestor GO terms for the particular input
GO term.
CambridgeCentreForProteomics/camprotR documentation built on July 7, 2024, 2:13 a.m.
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| get_all_mappings | R Documentation |
Get all mappings for GO terms
Description
For a vector of GO terms, obtain all of the ancestor or offspring terms.
Usage
get_all_mappings(go_ids, ontologies, verbose = TRUE, direction = "ancestor")
Arguments
go_ids |
|
ontologies |
|
verbose |
|
direction |
|
Value
Returns a named list of character vectors. Names == GO terms and
values == vectors containing all ancestor GO terms for the particular input
GO term.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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