get_abundance: retrieve abundance for plotting
In CshlSiepelLab/tuSelecter2: Deconvolution of Expression for Nascent RNA Sequencing Data
View source: R/tq_visualization.R
get_abundance R Documentation
retrieve abundance for plotting
Description
retrieve abundance for plotting
Usage
get_abundance(tq, chrom, start, end)
Arguments
tq
A transcript_quantifier-class object
chrom
the chromosome of your query region (single value)
start
the start position of your query region (single value)
end
the end position of your query region (single value)
Value
a GRanges-class objects with the adbundance in
the metadate column(s).
CshlSiepelLab/tuSelecter2 documentation built on June 2, 2025, 7:09 a.m.
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View source: R/tq_visualization.R
| get_abundance | R Documentation |
retrieve abundance for plotting
Description
retrieve abundance for plotting
Usage
get_abundance(tq, chrom, start, end)
Arguments
tq |
A transcript_quantifier-class object |
chrom |
the chromosome of your query region (single value) |
start |
the start position of your query region (single value) |
end |
the end position of your query region (single value) |
Value
a GRanges-class objects with the adbundance in the metadate column(s).
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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