example_input_e_coli: An example SummarizedExperiment from E. coli An example...

In CyanolabFreiburg/rifi: 'rifi' analyses data from rifampicin time series created by microarray or RNAseq

An example SummarizedExperiment from E. coli An example SummarizedExperiment from RNA-seq containing information about the intensities at all time points (assay). Seqnames, IRanges and strand columns (rowRanges)and colData with time point series and replicates.

Description

An example SummarizedExperiment from E. coli An example SummarizedExperiment from RNA-seq containing information about the intensities at all time points (assay). Seqnames, IRanges and strand columns (rowRanges)and colData with time point series and replicates.

Usage

data(example_input_e_coli)

Format

A assay:

0:

relative intensities at 0 min

1:

relative intensities at 1 min

10:

relative intensities at 10 min

15:

relative intensities at 15 min

2:

relative intensities at 2 min

20:

relative intensities at 20 min

3:

relative intensities at 3 min

4:

relative intensities at 4 min

5:

relative intensities at 5 min

6:

relative intensities at 6 min

8:

relative intensities at 8 min

Source

https://github.com/CyanolabFreiburg/rifi

CyanolabFreiburg/rifi documentation built on May 7, 2023, 7:53 p.m.