| CalculateMat | Chain all calculation about one dose-response matrix |
| CalculateSens | Calculate relative inhibition (RI) for dose-response curve |
| CalculateTemplate | Calculate Drug Combination data in template format |
| CellVersion | Check Cellosaurus XML file version. |
| CheckCell | Check whether input cell lines are archived in DrugComb |
| CheckDisease | Check whether input diseases are archived in DrugComb |
| CheckDrug | Check whether input drugs are archived in DrugComb |
| CheckTemplate | Check the input template |
| CheckTissue | Check whether input tissues are archived in DrugComb |
| ChemblVersion | Check version of ChEMBL database |
| drugcomb | Identifiers in DrugComb |
| GenerateCell | Generate "cell_line" and "cell_id" tables |
| GetAccession | Extract the Cellosaurus accession ID of one cell line. |
| GetAllSrcIds | Get all src_ids |
| GetCell | Extract the nodes containing information of inputted cell... |
| GetCellInfo | Extract cell line information |
| GetCellName | Extract primary name and synonyms of one cell line. |
| GetChembl | Get information from ChEMBL |
| GetChemblPhase | Get max clinical trial phase from ChEMBL ID |
| GetCid | Match CID according to other identifiers |
| GetDisease | Extract the disease information of one cell line. |
| GetIds | Get other identifiers from InChIKey |
| GetPubchemPro | Get properties of drugs |
| GetPubmed | Get publication information from Pubmed |
| GetPubNames | Get drug synonyms from PubChem |
| GetPubPhase | Get max clinical trial phase from Pubchem |
| GetPubSynonymFromName | Get drug synonyms from PubChem by Drug names |
| GetTissue | Extract the source tissue of one cell line. |
| ImputeIC50 | Impute missing value at IC50 concentration of drug |
| MatchCellAcc | Match cell line name with cellosaurus accession |
| own_log | CSS facilitate function - log calculation (nature based) LL.4... |
| own_log2 | CSS facilitate function - log (nature based) calculation L.4... |
| ParCalculateTemplate | Parallel Calculate Drug Combination data in template format |
| ParseCell | Parse the Cellosaurus XML file |
| PredictResponse | Predict response value at certain drug dose |
| RIConfidenceInterval | Calculate Confidence Interval of RI |
| scoreCurve | CSS facilitate function - scoreCurve for curves fitted by... |
| scoreCurve.L4 | CSS facilitate function - scoreCurve for curves fitted by L.4 |
| smoothing | Smoothing the dose response or synergy score surface |
| TidyComb | TidyComb: Preparing drug combination data for DrugComb |
| UpdateCell | Update local Cellosaurus XML file |
| UpdateCid | Get "Preferred Compound" of "Non-live" compounds in PubChem |
