GetCell: Extract the nodes containing information of inputted cell...
In DrugComb/TidyComb: Preparing drug combination data for DrugComb
View source: R/api_cellosaurus.R
GetCell R Documentation
Extract the nodes containing information of inputted cell lines
Description
This function searches the value of <name> tags in Cellosaurus XML document
to find entries that matches the names provided in the names
parameter.
Usage
GetCell(node, ids, type = "name")
Arguments
node
An XMLNodelist. It is the output of ParseCell
function which contains all cell lines' information in Cellosaurus dataset.
ids
A vector of characters. It is the name or Cellosaurus accession of
cell lines that will be searched in Cellosaurus XML file.
type
A charatcer. It indicate the type of id. It could be
"name", "accession".
Value
An XMLNodeSet containing matched cell lines in the dataset. If no
cell line is matched, a NULL list will be return.
Author(s)
Jing Tang jing.tang@helsinki.fi
Shuyu Zheng shuyu.zheng@helsinki.fi
DrugComb/TidyComb documentation built on June 22, 2022, 2:49 a.m.
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View source: R/api_cellosaurus.R
| GetCell | R Documentation |
Extract the nodes containing information of inputted cell lines
Description
This function searches the value of <name> tags in Cellosaurus XML document
to find entries that matches the names provided in the names
parameter.
Usage
GetCell(node, ids, type = "name")
Arguments
node |
An XMLNodelist. It is the output of |
ids |
A vector of characters. It is the name or Cellosaurus accession of cell lines that will be searched in Cellosaurus XML file. |
type |
A charatcer. It indicate the type of |
Value
An XMLNodeSet containing matched cell lines in the dataset. If no cell line is matched, a NULL list will be return.
Author(s)
Jing Tang jing.tang@helsinki.fi Shuyu Zheng shuyu.zheng@helsinki.fi
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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