drugcomb: Identifiers in DrugComb

In DrugComb/TidyComb: Preparing drug combination data for DrugComb

Identifiers in DrugComb

Description

A list containing the identifiers of drugs, diseases, tissues, cell_lines, studies archived in DrugComb.

Usage

drugcomb

Format

A list with 5 data frames:

cell_line

Contains 2 variables: cellosaurus_accession, id.

drug

Contains 2 variables: id, cid.

disease

Contains 2 variables: id, name.

tissue

Contains 2 variables: name, id.

study

Contains 1 variable: id.

Details

This is a list of identifiers of drugs, diseases, tissues, cell_lines, studies archived in DrugComb. Used to check the records currently exist in DrugComb and avoid generate duplicated entries.

The data is request from DrugComb database, using MySQL commands:

SELECT cellosaurus_accession,id FROM cell_line SELECT id,cid FROM drug SELECT * FROM disease SELECT * FROM tissue SELECT id FROM study;

Source

urlhttps://drugcomb.fimm.fi/

DrugComb/TidyComb documentation built on June 22, 2022, 2:49 a.m.