GenerateCell: Generate "cell_line" and "cell_id" tables
In DrugComb/TidyComb: Preparing drug combination data for DrugComb
View source: R/generate_cell.R
GenerateCell R Documentation
Generate "cell_line" and "cell_id" tables
Description
Generate "cell_line" and "cell_id" tables
Usage
GenerateCell(acc, file)
Arguments
acc
A vector of charactors contains cellosaurus accessions of
interested cell lines.
file
The path to Cellosaurus XML file which was posted on
https://web.expasy.org/cellosaurus/
Value
A list with 2 data frames:
-
cell_line The cell_line table prepared for uploading.
-
cell_id The DrugComb IDs for new cell lines.
Author(s)
Jing Tang jing.tang@helsinki.fi
Shuyu Zheng shuyu.zheng@helsinki.fi
DrugComb/TidyComb documentation built on June 22, 2022, 2:49 a.m.
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View source: R/generate_cell.R
| GenerateCell | R Documentation |
Generate "cell_line" and "cell_id" tables
Description
Generate "cell_line" and "cell_id" tables
Usage
GenerateCell(acc, file)
Arguments
acc |
A vector of charactors contains cellosaurus accessions of interested cell lines. |
file |
The path to Cellosaurus XML file which was posted on https://web.expasy.org/cellosaurus/ |
Value
A list with 2 data frames:
-
cell_line The cell_line table prepared for uploading.
-
cell_id The DrugComb IDs for new cell lines.
Author(s)
Jing Tang jing.tang@helsinki.fi Shuyu Zheng shuyu.zheng@helsinki.fi
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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