CheckCell: Check whether input cell lines are archived in DrugComb
In DrugComb/TidyComb: Preparing drug combination data for DrugComb
View source: R/check_drugcomb.R
CheckCell R Documentation
Check whether input cell lines are archived in DrugComb
Description
Function CheckCell compares cellosaurus accessions passed to
test argument with cell lines archived in DrugComb (extracted to
drugcomb R data). It will return the total number of cell lines
have been archived in DrugComb as well as which cell lines are already or not
yet archived in DrugComb.
Usage
CheckCell(test)
Arguments
test
A character vector. It contains cellosaurus accessions
of cell lines which would be checked.
Value
A list contains 3 elements:
-
n: It indicates that there are totally n cell lines archived
in DrugComb database.
-
old: It lists the cellosaurus accessions of cell
lines that have been archived in DrugComb.
-
new: It lists the cellosaurus accessions of cell
lines that are not yet in DrugComb.
Author(s)
Jing Tang jing.tang@helsinki.fi
Shuyu Zheng shuyu.zheng@helsinki.fi
DrugComb/TidyComb documentation built on June 22, 2022, 2:49 a.m.
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View source: R/check_drugcomb.R
| CheckCell | R Documentation |
Check whether input cell lines are archived in DrugComb
Description
Function CheckCell compares cellosaurus accessions passed to
test argument with cell lines archived in DrugComb (extracted to
drugcomb R data). It will return the total number of cell lines
have been archived in DrugComb as well as which cell lines are already or not
yet archived in DrugComb.
Usage
CheckCell(test)
Arguments
test |
A character vector. It contains cellosaurus accessions of cell lines which would be checked. |
Value
A list contains 3 elements:
-
n: It indicates that there are totally n cell lines archived in DrugComb database.
-
old: It lists the cellosaurus accessions of cell lines that have been archived in DrugComb.
-
new: It lists the cellosaurus accessions of cell lines that are not yet in DrugComb.
Author(s)
Jing Tang jing.tang@helsinki.fi Shuyu Zheng shuyu.zheng@helsinki.fi
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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