Files in GabrielHoffman/decorate
Differential Epigenetic Coregulation Test

.Rbuildignore
DESCRIPTION
NAMESPACE
NEWS.md R/RcppExports.R R/boxM.R R/combineResults.R R/evaluateCorrDecay.R R/extractCorrelationScores.R R/iterators.R R/local_correlations.R R/other_corr_tests.R R/plotCorrPairs.R R/plotEnsGenes.R R/plotGenes.R R/plots.R R/random_statistics.R R/run_sled.R R/sim_data.R README.md
TODO
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inst/CITATION
inst/unitTests/test_boxM.R inst/unitTests/test_corSubsetPairs.R man/boxM.Rd man/boxM_fast.Rd man/boxM_permute.Rd man/collapseClusters.Rd man/combineResults.Rd man/corSubsetPairs.Rd man/corrMatrix.test.Rd man/countClusters-methods.Rd man/createClusters.Rd man/createCorrelationMatrix.Rd man/decorateData.Rd man/delaneau.score.Rd man/delaneau.test.Rd man/dot-evalDiffCorr.Rd man/epiclust-class.Rd man/epiclustDiscreteList-class.Rd man/epiclustDiscreteListContain-class.Rd man/epiclustList-class.Rd man/evalDiffCorr-methods.Rd man/evaluateCorrDecay.Rd man/extractCorrelationScores.Rd
man/figures/logo.svg
man/filterClusters.Rd man/getClusterNames.Rd man/getClusterRanges.Rd man/getFeaturesInCluster.Rd man/getFeaturesInClusterList.Rd man/getPeakDistances.Rd man/getSubset-methods.Rd man/get_exon_coords.Rd man/ggplot_by_sampling.Rd man/jaccard.Rd man/makeImageRect.Rd man/plotClusterSegments.Rd man/plotCompareCorr.Rd man/plotCorrDecay.Rd man/plotCorrTriangle.Rd man/plotDecorate.Rd man/plotDensityPoints.Rd man/plotEnsGenes.Rd man/plotGenes.Rd man/plotPairwiseScatter.Rd man/plotScatterPairs.Rd man/retainClusters.Rd man/runFastStat.Rd man/runOrderedClustering.Rd man/runOrderedClusteringGenome.Rd man/runPermutedData.Rd man/sLEDresults-class.Rd man/scoreClusters.Rd man/sle.score.Rd man/sle.test.Rd man/sub-epiclustDiscreteListContain-ANY-ANY-ANY-method.Rd man/summary-sLEDresults-method.Rd man/whichCluster.Rd
src/Makevars
src/Makevars.win
src/RcppExports.cpp
src/boxM.cpp
src/corSubsetPairs.cpp
tests/runTests.R vignettes/decorate.Rmd
GabrielHoffman/decorate documentation built on Sept. 27, 2022, 1:26 a.m.